RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CT45A10P0DMU9 189 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 HLA-DRB4P13762 266 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 GNG4P50150 75 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 UBE2G1P62253 170 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 FLI1Q01543 452 aaPredicted RBP4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 FAM74A3Q4VXF1 159 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 TMEM78Q5T7P6 136 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 PRNTQ86SH4 94 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 DEFB125Q8N687 156 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 Q8NBF4 154 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 OR4B1Q8NGF8 309 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 SMIM7Q9BQ49 75 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 PARLQ9H300 379 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 ZNF492Q9P255 531 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 PSG8Q9UQ74 426 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 ZFP30Q9Y2G7 519 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 HLA-DRB4X5D2U9 266 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 MGAM2Q2M2H8 2515 aa4.25□□□□□ -1.73
NIFKP3-201ENST00000417799 IGHV3-38A0A0C4DH36 116 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 TRBV7-9A0A0J9YWB2 115 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 A8MTW9 85 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 C9JCJ5 164 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 F8W036 122 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 H7C423 109 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 ZNF138P52744 262 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 TMEM241Q24JQ0 296 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 CENPWQ5EE01 88 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 SAPCD1Q5SSQ6 148 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 Q86TA4 180 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 BAGE2Q86Y30 109 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 Q8TAT8 98 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 TVP23CQ96ET8 276 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 IGF2BP2-AS1Q96M15 143 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 ODF3Q96PU9 254 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 SEC11CQ9BY50 192 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 WFDC10AQ9H1F0 79 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 LENEPQ9Y5L5 61 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 LY96Q9Y6Y9 160 aa4.24□□□□□ -1.73
NIFKP3-201ENST00000417799 TRBV20OR9-2A0A075B6H5 130 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 RBMY1BA6NDE4 496 aaKnown RBP4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 RBMY1EA6NEQ0 496 aaKnown RBP4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 KRBOX1C9JBD0 128 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 IGLV2-8P01709 118 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 GPX1P07203 203 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 RBMY1DP0C7P1 496 aaKnown RBP4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 CRISP2P16562 243 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 ADCYAP1P18509 176 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 TSPOP30536 169 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 LEPP41159 167 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 NUTF2P61970 127 aaKnown RBP4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 HERV-K104P63124 156 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 C10orf91Q5T1B1 145 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 KPRPQ5T749 579 aaPredicted RBP4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 AMTNQ6UX39 209 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 TMEM183AQ8IXX5 376 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 SMIM12Q96EX1 92 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 FAM19A4Q96LR4 140 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 NIPSNAP3BQ9BS92 247 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 NDFIP1Q9BT67 221 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 TUBA4BQ9H853 241 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 NAT8Q9UHE5 227 aa4.23□□□□□ -1.73
NIFKP3-201ENST00000417799 PKD1L1Q8TDX9 2849 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 AGRNO00468 2067 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 KLLNB2CW77 178 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 M0R2Z0 102 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 GCGP01275 180 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 MGST1P10620 155 aaKnown RBP4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 RNASE4P34096 147 aaKnown RBP4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 CDKN1BP46527 198 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 SPINK13Q1W4C9 94 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 SMUG1Q53HV7 270 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 MORN3Q6PF18 240 aaPredicted RBP4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 LINC01551Q86U37 167 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 ZFAND2AQ8N6M9 145 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 ZC2HC1AQ96GY0 325 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 BIN3Q9NQY0 253 aa4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 CARHSP1Q9Y2V2 147 aaKnown RBP4.22□□□□□ -1.73
NIFKP3-201ENST00000417799 NOTCH1P46531 2555 aa4.21□□□□□ -1.73
NIFKP3-201ENST00000417799 CMYA5Q8N3K9 4069 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 LOC102724200A0A096LPH7 203 aaPredicted RBP4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 KIR2DL5BA0A0G2JN68 375 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 KIR2DL5BA0A0G2JPC4 375 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 C7orf71A4D174 169 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 FABP5P3A8MUU1 101 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 K7EN84 100 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 APOC3P02656 99 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 PRB2P02812 416 aaPredicted RBP4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 PFN1P07737 140 aaKnown RBP4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 GIG44P09565 113 aaPredicted RBP4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 CRIP1P50238 77 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 ZNF80P51504 273 aaPredicted RBP4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 FXYD7P58549 80 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 RPL23P62829 140 aaKnown RBP4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 RIGQ13278 110 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 OR5I1Q13606 314 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 ADIRFQ15847 76 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 FAM162BQ5T6X4 162 aa4.21□□□□□ -1.74
NIFKP3-201ENST00000417799 PRR9Q5T870 116 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms