RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NSD1Q96L73 2696 aaPredicted RBP12.41□□□□□ -0.42
SSBP3-205ENST00000417664 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
SSBP3-205ENST00000417664 SAP30O75446 220 aa12.41□□□□□ -0.42
SSBP3-205ENST00000417664 AP1S3Q96PC3 154 aa12.41□□□□□ -0.42
SSBP3-205ENST00000417664 C20orf144Q9BQM9 153 aa12.41□□□□□ -0.42
SSBP3-205ENST00000417664 TIMM8BQ9Y5J9 83 aaPredicted RBP12.41□□□□□ -0.42
SSBP3-205ENST00000417664 TRGV11A0A075B6L2 103 aa12.4□□□□□ -0.42
SSBP3-205ENST00000417664 M0R381 172 aa12.4□□□□□ -0.42
SSBP3-205ENST00000417664 IGLV1-51P01701 117 aa12.4□□□□□ -0.42
SSBP3-205ENST00000417664 DEFB125Q8N687 156 aa12.4□□□□□ -0.42
SSBP3-205ENST00000417664 MAP1LC3AQ9H492 121 aa12.4□□□□□ -0.42
SSBP3-205ENST00000417664 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
SSBP3-205ENST00000417664 IGHV3-16A0A0C4DH30 117 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 IGHV1-24A0A0C4DH33 117 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 OR11H12B2RN74 326 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 NPYP01303 97 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 ODF3L2Q3SX64 289 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 CDPF1Q6NVV7 123 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 C9orf85Q96MD7 179 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 GSN-AS1Q9NRJ2 163 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 HIVEP1P15822 2718 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 AGRNO00468 2067 aa12.39□□□□□ -0.43
SSBP3-205ENST00000417664 PCP4L1A6NKN8 68 aa12.38□□□□□ -0.43
SSBP3-205ENST00000417664 PRSS47A8MTI9 375 aa12.38□□□□□ -0.43
SSBP3-205ENST00000417664 KRTDAPP60985 99 aa12.38□□□□□ -0.43
SSBP3-205ENST00000417664 NXT2Q9NPJ8 142 aaKnown RBP12.38□□□□□ -0.43
SSBP3-205ENST00000417664 FN1P02751 2386 aaKnown RBP12.38□□□□□ -0.43
SSBP3-205ENST00000417664 CRXO43186 299 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-205ENST00000417664 TNFRSF6BO95407 300 aa12.38□□□□□ -0.43
SSBP3-205ENST00000417664 PF4P02776 101 aa12.38□□□□□ -0.43
SSBP3-205ENST00000417664 IFI27P40305 119 aaPredicted RBP12.38□□□□□ -0.43
SSBP3-205ENST00000417664 Q8N1Y9 231 aa12.38□□□□□ -0.43
SSBP3-205ENST00000417664 SETD2Q9BYW2 2564 aaPredicted RBP12.37□□□□□ -0.43
SSBP3-205ENST00000417664 WNK1Q9H4A3 2382 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 SMKR1H3BMG3 65 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 LEPROTL1O95214 131 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 NCR2O95944 276 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 C3orf79P0CE67 100 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 STHQ8IWL8 128 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 SYT8Q8NBV8 401 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 LINC00467Q9BRT7 94 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 HSPB8Q9UJY1 196 aa12.37□□□□□ -0.43
SSBP3-205ENST00000417664 SETXQ7Z333 2677 aaKnown RBP12.37□□□□□ -0.43
SSBP3-205ENST00000417664 RBMY1BA6NDE4 496 aaKnown RBP12.36□□□□□ -0.43
SSBP3-205ENST00000417664 RBMY1EA6NEQ0 496 aaKnown RBP12.36□□□□□ -0.43
SSBP3-205ENST00000417664 LINC01546A6NGU7 62 aa12.36□□□□□ -0.43
SSBP3-205ENST00000417664 PPP1R17O96001 155 aa12.36□□□□□ -0.43
SSBP3-205ENST00000417664 RBMY1DP0C7P1 496 aaKnown RBP12.36□□□□□ -0.43
SSBP3-205ENST00000417664 BTF3P20290 206 aaKnown RBP12.36□□□□□ -0.43
SSBP3-205ENST00000417664 POM121L12Q8N7R1 296 aa12.36□□□□□ -0.43
SSBP3-205ENST00000417664 LOC389332A0A1B0GUA5 103 aa12.35□□□□□ -0.43
SSBP3-205ENST00000417664 SMIM17P0DL12 118 aa12.35□□□□□ -0.43
SSBP3-205ENST00000417664 NUTF2P61970 127 aaKnown RBP12.35□□□□□ -0.43
SSBP3-205ENST00000417664 ZNF124Q15973 351 aa12.35□□□□□ -0.43
SSBP3-205ENST00000417664 BEAN1Q3B7T3 259 aa12.35□□□□□ -0.43
SSBP3-205ENST00000417664 PKIAP61925 76 aa12.35□□□□□ -0.43
SSBP3-205ENST00000417664 LINC00482Q8N8I6 264 aa12.35□□□□□ -0.43
SSBP3-205ENST00000417664 TSTD3H0UI37 97 aa12.34□□□□□ -0.43
SSBP3-205ENST00000417664 INSP01308 110 aa12.34□□□□□ -0.43
SSBP3-205ENST00000417664 TEX43Q6ZNM6 134 aa12.34□□□□□ -0.43
SSBP3-205ENST00000417664 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
SSBP3-205ENST00000417664 C14orf178Q8N769 122 aaPredicted RBP12.34□□□□□ -0.43
SSBP3-205ENST00000417664 NRACQ8N912 160 aa12.34□□□□□ -0.43
SSBP3-205ENST00000417664 TMEM70Q9BUB7 260 aa12.34□□□□□ -0.43
SSBP3-205ENST00000417664 MDFICQ9P1T7 246 aa12.34□□□□□ -0.43
SSBP3-205ENST00000417664 C2CD3Q4AC94 2353 aa12.34□□□□□ -0.43
SSBP3-205ENST00000417664 CBY3A6NI87 242 aa12.33□□□□□ -0.44
SSBP3-205ENST00000417664 INSL3P51460 131 aa12.33□□□□□ -0.44
SSBP3-205ENST00000417664 FXYD7P58549 80 aa12.33□□□□□ -0.44
SSBP3-205ENST00000417664 PMCHL1Q16048 86 aa12.33□□□□□ -0.44
SSBP3-205ENST00000417664 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
SSBP3-205ENST00000417664 Q8N8P6 123 aa12.33□□□□□ -0.44
SSBP3-205ENST00000417664 RBMY1A1P0DJD3 496 aaKnown RBP12.32□□□□□ -0.44
SSBP3-205ENST00000417664 RBMY1CP0DJD4 496 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 RBMY1FQ15415 496 aaKnown RBP12.32□□□□□ -0.44
SSBP3-205ENST00000417664 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 KIF25-AS1Q9Y6Z4 181 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 HBDP02042 147 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 Q8N976 141 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 PTH2Q96A98 100 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 MAP1LC3CQ9BXW4 147 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 MUC4Q99102 2169 aa12.32□□□□□ -0.44
SSBP3-205ENST00000417664 K7EMI3 77 aa12.31□□□□□ -0.44
SSBP3-205ENST00000417664 GAS8-AS1O95177 125 aa12.31□□□□□ -0.44
SSBP3-205ENST00000417664 ZNF664Q8N3J9 261 aa12.31□□□□□ -0.44
SSBP3-205ENST00000417664 CITED1Q99966 193 aa12.31□□□□□ -0.44
SSBP3-205ENST00000417664 IGLV2-18A0A075B6J9 118 aa12.3□□□□□ -0.44
SSBP3-205ENST00000417664 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
SSBP3-205ENST00000417664 SPRY2O43597 315 aa12.3□□□□□ -0.44
SSBP3-205ENST00000417664 GATA1P15976 413 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-205ENST00000417664 LINC00315P59091 139 aa12.3□□□□□ -0.44
SSBP3-205ENST00000417664 ZNF415Q09FC8 603 aa12.3□□□□□ -0.44
SSBP3-205ENST00000417664 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-205ENST00000417664 C20orf202A1L168 122 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 SYS1-DBNDD2H3BUS1 97 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 MGPP08493 103 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 PET117Q6UWS5 81 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 ZNF747Q9BV97 191 aa12.29□□□□□ -0.44
SSBP3-205ENST00000417664 A0A096LNJ9 63 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms