RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	OCC1	Q8TAD7	63 aa		11.44	□□□□□ -0.58
DDR1-231	ENST00000417521	SMIM7	Q9BQ49	75 aa		11.44	□□□□□ -0.58
DDR1-231	ENST00000417521	SMDT1	Q9H4I9	107 aa		11.44	□□□□□ -0.58
DDR1-231	ENST00000417521	SDF2L1	Q9HCN8	221 aa		11.44	□□□□□ -0.58
DDR1-231	ENST00000417521	DNAH2	Q9P225	4427 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521	TRAV26-1	A0A087WT03	109 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521	TRGV1	A0A0A0MS02	117 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521	ZNF727	A8MUV8	499 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521		H3BNG1	76 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521	CCL18	P55774	89 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521		Q6ZR54	194 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521	SMIM12	Q96EX1	92 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521	KCNS1	Q96KK3	526 aa		11.43	□□□□□ -0.58
DDR1-231	ENST00000417521	IGLV2-18	A0A075B6J9	118 aa		11.42	□□□□□ -0.58
DDR1-231	ENST00000417521	TRGV11	A0A075B6L2	103 aa		11.42	□□□□□ -0.58
DDR1-231	ENST00000417521	TMSB15B	A0A087X1C1	80 aa		11.42	□□□□□ -0.58
DDR1-231	ENST00000417521	IGHV3-16	A0A0C4DH30	117 aa		11.42	□□□□□ -0.58
DDR1-231	ENST00000417521		K7EN84	100 aa		11.42	□□□□□ -0.58
DDR1-231	ENST00000417521	ZNF415	Q09FC8	603 aa		11.42	□□□□□ -0.58
DDR1-231	ENST00000417521		B4DEV8	164 aa		11.41	□□□□□ -0.58
DDR1-231	ENST00000417521	KRBOX1	C9JBD0	128 aa		11.41	□□□□□ -0.58
DDR1-231	ENST00000417521	ZNF575	Q86XF7	245 aa		11.41	□□□□□ -0.58
DDR1-231	ENST00000417521	HECTD4	Q9Y4D8	3996 aa		11.41	□□□□□ -0.58
DDR1-231	ENST00000417521		A0A0J9YY99	117 aa		11.4	□□□□□ -0.58
DDR1-231	ENST00000417521	GRIFIN	A4D1Z8	144 aa		11.4	□□□□□ -0.58
DDR1-231	ENST00000417521	RPL19	P84098	196 aa	Known RBP	11.4	□□□□□ -0.58
DDR1-231	ENST00000417521	LINC01559	Q495D7	138 aa		11.4	□□□□□ -0.58
DDR1-231	ENST00000417521	COMMD7	Q86VX2	200 aa		11.39	□□□□□ -0.59
DDR1-231	ENST00000417521	ZNRF2	Q8NHG8	242 aa		11.39	□□□□□ -0.59
DDR1-231	ENST00000417521	LINC00588	Q9Y4M8	146 aa		11.39	□□□□□ -0.59
DDR1-231	ENST00000417521	C19orf71	A6NCJ1	209 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	RTL8C	O15255	209 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	SFTA3	P0C7M3	94 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	FAM74A3	Q4VXF1	159 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	SOHLH1	Q5JUK2	328 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	LINC01551	Q86U37	167 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	DAZAP1	Q96EP5	407 aa	Known RBP	11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	SPX	Q9BT56	116 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	BIN3	Q9NQY0	253 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	MRPL16	Q9NX20	251 aa	Known RBP	11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	DNAH17	Q9UFH2	4485 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	FAT2	Q9NYQ8	4349 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	LINC00862	A6NCI5	91 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	RNASE3	P12724	160 aa	Known RBP	11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	ASIP	P42127	132 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	TMEM241	Q24JQ0	296 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	VSIG2	Q96IQ7	327 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	RNASE7	Q9H1E1	156 aa	Known RBP	11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	LY96	Q9Y6Y9	160 aa		11.38	□□□□□ -0.59
DDR1-231	ENST00000417521	S100A4	P26447	101 aa	Known RBP	11.37	□□□□□ -0.59
DDR1-231	ENST00000417521	SLA	Q13239	276 aa		11.37	□□□□□ -0.59
DDR1-231	ENST00000417521	NUDT10	Q8NFP7	164 aa		11.37	□□□□□ -0.59
DDR1-231	ENST00000417521	NUDT11	Q96G61	164 aa		11.37	□□□□□ -0.59
DDR1-231	ENST00000417521		H3BVH4	76 aa		11.36	□□□□□ -0.59
DDR1-231	ENST00000417521		P01737	135 aa		11.36	□□□□□ -0.59
DDR1-231	ENST00000417521	OR2D3	Q8NGH3	330 aa		11.36	□□□□□ -0.59
DDR1-231	ENST00000417521	RASL10A	Q92737	203 aa		11.36	□□□□□ -0.59
DDR1-231	ENST00000417521	C9orf85	Q96MD7	179 aa		11.36	□□□□□ -0.59
DDR1-231	ENST00000417521	MUC4	Q99102	2169 aa		11.36	□□□□□ -0.59
DDR1-231	ENST00000417521	NBDY	A0A0U1RRE5	68 aa		11.35	□□□□□ -0.59
DDR1-231	ENST00000417521	PRSS29P	A6NIE9	313 aa		11.35	□□□□□ -0.59
DDR1-231	ENST00000417521	GZMB	P10144	247 aa		11.35	□□□□□ -0.59
DDR1-231	ENST00000417521	RPL23	P62829	140 aa	Known RBP	11.35	□□□□□ -0.59
DDR1-231	ENST00000417521	C1orf134	Q5TEV5	83 aa		11.35	□□□□□ -0.59
DDR1-231	ENST00000417521	UQCC3	Q6UW78	93 aa		11.35	□□□□□ -0.59
DDR1-231	ENST00000417521	NAT8	Q9UHE5	227 aa		11.35	□□□□□ -0.59
DDR1-231	ENST00000417521	PRO0255	Q9UI72	69 aa		11.35	□□□□□ -0.59
DDR1-231	ENST00000417521		A0A096LPF7	62 aa		11.34	□□□□□ -0.59
DDR1-231	ENST00000417521		M0R2P5	195 aa		11.34	□□□□□ -0.59
DDR1-231	ENST00000417521	ARMS2	P0C7Q2	107 aa		11.34	□□□□□ -0.59
DDR1-231	ENST00000417521	ADIRF	Q15847	76 aa		11.34	□□□□□ -0.59
DDR1-231	ENST00000417521	ESRG	Q1W209	222 aa		11.34	□□□□□ -0.59
DDR1-231	ENST00000417521	DNLZ	Q5SXM8	178 aa		11.34	□□□□□ -0.59
DDR1-231	ENST00000417521	IL36B	Q9NZH7	164 aa		11.34	□□□□□ -0.59
DDR1-231	ENST00000417521	PAX4	O43316	350 aa		11.33	□□□□□ -0.6
DDR1-231	ENST00000417521	IGHV3-53	P01767	116 aa		11.33	□□□□□ -0.6
DDR1-231	ENST00000417521	ERVFC1-1	P60608	527 aa		11.33	□□□□□ -0.6
DDR1-231	ENST00000417521	FHL2	Q14192	279 aa		11.33	□□□□□ -0.6
DDR1-231	ENST00000417521	UPK3B	Q9BT76	320 aa		11.33	□□□□□ -0.6
DDR1-231	ENST00000417521		Q9H8V8	135 aa		11.33	□□□□□ -0.6
DDR1-231	ENST00000417521	HHLA3	Q9XRX5	114 aa		11.33	□□□□□ -0.6
DDR1-231	ENST00000417521		A0A1B0GVY2	172 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	CXCL1	P09341	107 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	ISOC2	Q96AB3	205 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	RPP21	Q9H633	154 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	MRPS16	Q9Y3D3	137 aa	Known RBP	11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	TMEM218	A2RU14	115 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	CRYBA4	P53673	196 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	ZNF876P	Q49A33	203 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	FAM231D	Q6ZW35	169 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	SCRT2	Q9NQ03	307 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	ICOS	Q9Y6W8	199 aa		11.32	□□□□□ -0.6
DDR1-231	ENST00000417521	MUC21	A0A0G2JKD1	596 aa		11.31	□□□□□ -0.6
DDR1-231	ENST00000417521	MUC21	A0A140T8X8	626 aa		11.31	□□□□□ -0.6
DDR1-231	ENST00000417521	GATC	O43716	136 aa	Known RBP	11.31	□□□□□ -0.6
DDR1-231	ENST00000417521	ADCYAP1	P18509	176 aa		11.31	□□□□□ -0.6
DDR1-231	ENST00000417521	RPS20	P60866	119 aa	Known RBP	11.31	□□□□□ -0.6
DDR1-231	ENST00000417521	ZNF479	Q96JC4	524 aa		11.31	□□□□□ -0.6
DDR1-231	ENST00000417521	TRGV4	A0A0C4DH28	118 aa		11.3	□□□□□ -0.6
DDR1-231	ENST00000417521	MRPL23	Q16540	153 aa	Known RBP	11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 431.4 ms