RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SPANXN1Q5VSR9 72 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 ASCL5Q7RTU5 278 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 FAM216BQ8N7L0 139 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 SMCR5Q8TEV8 140 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 HES7Q9BYE0 225 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 ICOSQ9Y6W8 199 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 FRYQ5TBA9 3013 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 IGHV4-4A0A075B6R2 117 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 IGHV7-4-1A0A0J9YVY3 117 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 TEX22C9J3V5 150 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 ATOX1O00244 68 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 ENSAO43768 121 aaKnown RBP4.85□□□□□ -1.63
CCNT1-202ENST00000417344 CRYGBP07316 175 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 COX6CP09669 75 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 PMS2CLQ68D20 193 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 C5orf38Q86SI9 138 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 DEFB108BQ8NET1 73 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 CCL13Q99616 98 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 CYSTM1Q9H1C7 97 aa4.85□□□□□ -1.63
CCNT1-202ENST00000417344 MBD3L4A6NDZ8 208 aaPredicted RBP4.84□□□□□ -1.63
CCNT1-202ENST00000417344 MBD3L3A6NE82 208 aaPredicted RBP4.84□□□□□ -1.63
CCNT1-202ENST00000417344 MBD3L5A6NJ08 208 aaPredicted RBP4.84□□□□□ -1.63
CCNT1-202ENST00000417344 LST1O00453 97 aa4.84□□□□□ -1.63
CCNT1-202ENST00000417344 TSHBP01222 138 aa4.84□□□□□ -1.63
CCNT1-202ENST00000417344 DLX1P56177 255 aa4.84□□□□□ -1.63
CCNT1-202ENST00000417344 LINC00482Q8N8I6 264 aa4.84□□□□□ -1.63
CCNT1-202ENST00000417344 EEF1AKMT3Q96AZ1 226 aa4.84□□□□□ -1.63
CCNT1-202ENST00000417344 NBEAQ8NFP9 2946 aa4.84□□□□□ -1.63
CCNT1-202ENST00000417344 NAV3Q8IVL0 2385 aa4.84□□□□□ -1.63
CCNT1-202ENST00000417344 IGHV1-69DA0A0B4J2H0 117 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 PCNX2A6NKB5 2137 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 K7EIM0 57 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 SPRY3O43610 288 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 CD59P13987 128 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 CNTFRP26992 372 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 UBE2E1P51965 193 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 DLX6P56179 175 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 HIST1H4AP62805 103 aaKnown RBP4.84□□□□□ -1.64
CCNT1-202ENST00000417344 IGFL4Q6B9Z1 124 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 CLEC2BQ92478 149 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 RPL39LQ96EH5 51 aaKnown RBP4.84□□□□□ -1.64
CCNT1-202ENST00000417344 DSCR8Q96T75 97 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 C11orf21Q9P2W6 132 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 RNF7Q9UBF6 113 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 PLA2G2DQ9UNK4 145 aa4.84□□□□□ -1.64
CCNT1-202ENST00000417344 IGHV3-72A0A0B4J1Y9 119 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 LY6G6EA0A0G2JKS1 128 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 LEPROTO15243 131 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 SPRY2O43597 315 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 CCL3L1P16619 93 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 SDIM1Q6ZPB5 146 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 Q6ZT83 130 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 DYNAPQ8N1N2 210 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 FAM19A4Q96LR4 140 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 AGPAT4-IT1Q9H0P7 198 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 JPT2Q9H910 190 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 U3KQA8 63 aa4.83□□□□□ -1.64
CCNT1-202ENST00000417344 FREM2Q5SZK8 3169 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 IGIPA6NJ69 53 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 CCL4P13236 92 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 LINC00311Q8N616 119 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 DCANP1Q8TF63 244 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 PIMREGQ9BSJ6 248 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 PRO0628Q9UI54 55 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 TP53TG1Q9Y2A0 90 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 DOCK10Q96BY6 2186 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 SVILO95425 2214 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 TRAV8-3A0A0A6YYJ7 113 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 TRBV7-1A0A0A6YYK4 115 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 TRAV13-1A0A0B4J241 112 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 IGHV1-18A0A0C4DH31 117 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 SDHAF1A6NFY7 115 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 J3QLI3 93 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 IGLV1-44P01699 117 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 MALP21145 153 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 ZNF876PQ49A33 203 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 INTS1Q8N201 2190 aaKnown RBP4.82□□□□□ -1.64
CCNT1-202ENST00000417344 C8orf31Q8N9H6 132 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 TMEM141Q96I45 108 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 DKK4Q9UBT3 224 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 PYGO1Q9Y3Y4 419 aa4.82□□□□□ -1.64
CCNT1-202ENST00000417344 A0A0J9YX75 114 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 PRAC2D3DTV9 90 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 M0R381 172 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 RNF152Q8N8N0 203 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 MAFAQ8NHW3 353 aaPredicted RBP4.81□□□□□ -1.64
CCNT1-202ENST00000417344 C16orf92Q96LL3 132 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 LINC00477Q96M19 166 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 PEMTQ9UBM1 199 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
CCNT1-202ENST00000417344 I3L3M4 83 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 K7ENP7 123 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 PPP1R17O96001 155 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 CCL8P80075 99 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 RPL18AQ02543 176 aaKnown RBP4.8□□□□□ -1.64
CCNT1-202ENST00000417344 RHOHQ15669 191 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 TMEM200BQ69YZ2 307 aa4.8□□□□□ -1.64
CCNT1-202ENST00000417344 GFRALQ6UXV0 394 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms