RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
LINC00339-202ENST00000416769 BTN1A1Q13410 526 aa8.96□□□□□ -0.98
LINC00339-202ENST00000416769 NDUFA5Q16718 116 aa8.96□□□□□ -0.98
LINC00339-202ENST00000416769 TMEM241Q24JQ0 296 aa8.96□□□□□ -0.98
LINC00339-202ENST00000416769 OCC1Q8TAD7 63 aa8.96□□□□□ -0.98
LINC00339-202ENST00000416769 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 H7BYZ3 331 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 PFN1P07737 140 aaKnown RBP8.95□□□□□ -0.98
LINC00339-202ENST00000416769 SFTA3P0C7M3 94 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 HTN1P15515 57 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 CRIP1P50238 77 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 FAM3BP58499 235 aaPredicted RBP8.95□□□□□ -0.98
LINC00339-202ENST00000416769 NHLRC2Q8NBF2 726 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 ZC2HC1AQ96GY0 325 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 LINC01587Q99440 93 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 LINC00467Q9BRT7 94 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 NAT8Q9UHE5 227 aa8.95□□□□□ -0.98
LINC00339-202ENST00000416769 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
LINC00339-202ENST00000416769 MGST1P10620 155 aaKnown RBP8.94□□□□□ -0.98
LINC00339-202ENST00000416769 FAM162BQ5T6X4 162 aa8.94□□□□□ -0.98
LINC00339-202ENST00000416769 PYGO2Q9BRQ0 406 aa8.94□□□□□ -0.98
LINC00339-202ENST00000416769 SDF2L1Q9HCN8 221 aa8.94□□□□□ -0.98
LINC00339-202ENST00000416769 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
LINC00339-202ENST00000416769 FLG2Q5D862 2391 aaPredicted RBP8.93□□□□□ -0.98
LINC00339-202ENST00000416769 PGPEP1LA6NFU8 196 aa8.93□□□□□ -0.98
LINC00339-202ENST00000416769 Q6ZQT7 251 aa8.93□□□□□ -0.98
LINC00339-202ENST00000416769 IGHV1OR15-1A0A075B7D0 117 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 A0A0J9YY99 117 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 F8W036 122 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 K7EN84 100 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 SH2D1AO60880 128 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 ATP5G1P05496 136 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 HOXA5P20719 270 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 CCL18P55774 89 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 RPL23P62829 140 aaKnown RBP8.92□□□□□ -0.98
LINC00339-202ENST00000416769 TDRG1Q3Y452 100 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 DAZAP1Q96EP5 407 aaKnown RBP8.92□□□□□ -0.98
LINC00339-202ENST00000416769 KCNS1Q96KK3 526 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 SEC11CQ9BY50 192 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 Q9H8V8 135 aa8.92□□□□□ -0.98
LINC00339-202ENST00000416769 NOP10Q9NPE3 64 aaKnown RBP8.92□□□□□ -0.98
LINC00339-202ENST00000416769 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 C19orf71A6NCJ1 209 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 OR5I1Q13606 314 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 ANXA2RQ3ZCQ2 193 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 PRR27Q6MZM9 219 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 FAM231DQ6ZW35 169 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 SLC7A5P1Q8MH63 180 aa8.91□□□□□ -0.98
LINC00339-202ENST00000416769 IGKV3D-20A0A0C4DH25 116 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 CBY3A6NI87 242 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 ORM1P02763 201 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 PNRC1Q12796 327 aaPredicted RBP8.9□□□□□ -0.98
LINC00339-202ENST00000416769 ESRGQ1W209 222 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 NUDT10Q8NFP7 164 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 RNASE8Q8TDE3 154 aaKnown RBP8.9□□□□□ -0.98
LINC00339-202ENST00000416769 NUDT11Q96G61 164 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 C11orf21Q9P2W6 132 aa8.9□□□□□ -0.98
LINC00339-202ENST00000416769 KRBOX1C9JBD0 128 aa8.89□□□□□ -0.99
LINC00339-202ENST00000416769 ADCYAP1P18509 176 aa8.89□□□□□ -0.99
LINC00339-202ENST00000416769 MUC21Q5SSG8 566 aa8.89□□□□□ -0.99
LINC00339-202ENST00000416769 ISOC2Q96AB3 205 aa8.89□□□□□ -0.99
LINC00339-202ENST00000416769 OSTCQ9NRP0 149 aa8.89□□□□□ -0.99
LINC00339-202ENST00000416769 TRGV11A0A075B6L2 103 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 A6NJY4 79 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 B4DEV8 164 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 GNRH2O43555 120 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 P01737 135 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 ERVFC1-1P60608 527 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 ADIRFQ15847 76 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 DNLZQ5SXM8 178 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 IBA57Q5T440 356 aaKnown RBP8.88□□□□□ -0.99
LINC00339-202ENST00000416769 TMEM263Q8WUH6 116 aaKnown RBP8.88□□□□□ -0.99
LINC00339-202ENST00000416769 C16orf74Q96GX8 76 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 RNASE7Q9H1E1 156 aaKnown RBP8.88□□□□□ -0.99
LINC00339-202ENST00000416769 NAGKQ9UJ70 344 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 TP53TG3Q9ULZ0 132 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 CARHSP1Q9Y2V2 147 aaKnown RBP8.88□□□□□ -0.99
LINC00339-202ENST00000416769 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
LINC00339-202ENST00000416769 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 GAGE12BA1L429 117 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 GATCO43716 136 aaKnown RBP8.87□□□□□ -0.99
LINC00339-202ENST00000416769 GAGE7O76087 117 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 TYMSP04818 313 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 CXCL1P09341 107 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 GAGE12FP0CL80 117 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 GAGE12GP0CL81 117 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 GAGE12IP0CL82 117 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 RPS20P60866 119 aaKnown RBP8.87□□□□□ -0.99
LINC00339-202ENST00000416769 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-202ENST00000416769 LINC00612Q8N6U2 182 aa8.87□□□□□ -0.99
LINC00339-202ENST00000416769 TIMM8BQ9Y5J9 83 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-202ENST00000416769 XKRY2A2RUG3 117 aa8.86□□□□□ -0.99
LINC00339-202ENST00000416769 M0R036 132 aa8.86□□□□□ -0.99
LINC00339-202ENST00000416769 LINC00315P59091 139 aa8.86□□□□□ -0.99
LINC00339-202ENST00000416769 C15orf54Q8N8G6 183 aa8.86□□□□□ -0.99
LINC00339-202ENST00000416769 C11orf72Q8NBR9 251 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms