RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DMBT1Q9UGM3 2413 aaPredicted RBP9.65□□□□□ -0.86
PAF1-202ENST00000416728 SUMO1P63165 101 aaKnown RBP9.64□□□□□ -0.87
PAF1-202ENST00000416728 FLI1Q01543 452 aaPredicted RBP9.64□□□□□ -0.87
PAF1-202ENST00000416728 SMUG1Q53HV7 270 aa9.64□□□□□ -0.87
PAF1-202ENST00000416728 PRNTQ86SH4 94 aa9.64□□□□□ -0.87
PAF1-202ENST00000416728 ATP6V0E2Q8NHE4 81 aa9.64□□□□□ -0.87
PAF1-202ENST00000416728 PTH2Q96A98 100 aa9.64□□□□□ -0.87
PAF1-202ENST00000416728 GTSF1LQ9H1H1 148 aa9.64□□□□□ -0.87
PAF1-202ENST00000416728 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 RNASE3P12724 160 aaKnown RBP9.63□□□□□ -0.87
PAF1-202ENST00000416728 LAGE3Q14657 143 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 Q6ZSN1 163 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 CYB561D1Q8N8Q1 229 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 SUN5Q8TC36 379 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 PSMG3Q9BT73 122 aaPredicted RBP9.63□□□□□ -0.87
PAF1-202ENST00000416728 TMEM167BQ9NRX6 74 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 EPDR1Q9UM22 224 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 GGTLC3B5MD39 225 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 IGLV2-11P01706 119 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 MBP02144 154 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 S100A1P23297 94 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 SAPCD1Q5SSQ6 148 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
PAF1-202ENST00000416728 CXorf1O96002 111 aa9.62□□□□□ -0.87
PAF1-202ENST00000416728 ATP6V0CP27449 155 aa9.62□□□□□ -0.87
PAF1-202ENST00000416728 SERF2P84101 59 aa9.62□□□□□ -0.87
PAF1-202ENST00000416728 SH3BGRL3Q9H299 93 aa9.62□□□□□ -0.87
PAF1-202ENST00000416728 A8MWV9 139 aa9.61□□□□□ -0.87
PAF1-202ENST00000416728 S100A4P26447 101 aaKnown RBP9.61□□□□□ -0.87
PAF1-202ENST00000416728 AQP10Q96PS8 301 aa9.61□□□□□ -0.87
PAF1-202ENST00000416728 ACTR3CQ9C0K3 210 aaPredicted RBP9.61□□□□□ -0.87
PAF1-202ENST00000416728 PARLQ9H300 379 aa9.61□□□□□ -0.87
PAF1-202ENST00000416728 ALG5Q9Y673 324 aa9.61□□□□□ -0.87
PAF1-202ENST00000416728 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 GAGE1Q13065 139 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 GAGE4Q13068 117 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 GAGE5Q13069 117 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 LGALSLQ3ZCW2 172 aaPredicted RBP9.6□□□□□ -0.87
PAF1-202ENST00000416728 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 FAM30AQ9NZY2 134 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 TNFSF18Q9UNG2 199 aa9.6□□□□□ -0.87
PAF1-202ENST00000416728 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 IGKV3D-20A0A0C4DH25 116 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 A0A1W2PRE2 83 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 C1QBP02746 253 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 ASIPP42127 132 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 PIK3CD-AS1Q5SR53 167 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 Q8N3U1 123 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 ARL2-SNX15V9GYD0 113 aa9.59□□□□□ -0.87
PAF1-202ENST00000416728 FLG2Q5D862 2391 aaPredicted RBP9.59□□□□□ -0.87
PAF1-202ENST00000416728 TRAV34A0A0B4J273 112 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 FABP5P3A8MUU1 101 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 IFNA7P01567 189 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 LINC00694P0DN24 101 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 WFDC2Q14508 124 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 NDUFA5Q16718 116 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 TOR2AQ5JU69 321 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 OR2T35Q8NGX2 323 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 LINC00479Q96M42 142 aa9.58□□□□□ -0.88
PAF1-202ENST00000416728 hCG_2014768A0A024R1R8 64 aa9.57□□□□□ -0.88
PAF1-202ENST00000416728 A0A087WWC5 75 aa9.57□□□□□ -0.88
PAF1-202ENST00000416728 DAZ4Q86SG3 579 aaKnown RBP9.57□□□□□ -0.88
PAF1-202ENST00000416728 MED28Q9H204 178 aa9.57□□□□□ -0.88
PAF1-202ENST00000416728 DAZ3Q9NR90 486 aaKnown RBP9.57□□□□□ -0.88
PAF1-202ENST00000416728 IL36BQ9NZH7 164 aa9.57□□□□□ -0.88
PAF1-202ENST00000416728 MYCBP2O75592 4640 aa9.56□□□□□ -0.88
PAF1-202ENST00000416728 LECT2O14960 151 aa9.56□□□□□ -0.88
PAF1-202ENST00000416728 FGF8P55075 233 aaPredicted RBP9.56□□□□□ -0.88
PAF1-202ENST00000416728 JPT2Q9H910 190 aa9.56□□□□□ -0.88
PAF1-202ENST00000416728 B4DEV8 164 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 H3BVH4 76 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 RHODO00212 210 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 PEX7O00628 323 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 UBE2G2P60604 165 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 UFSP1Q6NVU6 142 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 Q86TA4 180 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 C14orf178Q8N769 122 aaPredicted RBP9.55□□□□□ -0.88
PAF1-202ENST00000416728 SYT8Q8NBV8 401 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 INO80EQ8NBZ0 244 aaPredicted RBP9.55□□□□□ -0.88
PAF1-202ENST00000416728 SAMD10Q9BYL1 202 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 Q9UF83 564 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 COX11Q9Y6N1 276 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 URGCP-MRPS24S4R325 110 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 VPS13BQ7Z7G8 4022 aa9.55□□□□□ -0.88
PAF1-202ENST00000416728 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.54□□□□□ -0.88
PAF1-202ENST00000416728 BORCS7-ASMTA0A0B4J1R7 106 aa9.54□□□□□ -0.88
PAF1-202ENST00000416728 CTXND1A0A1B0GTU2 59 aa9.54□□□□□ -0.88
PAF1-202ENST00000416728 J3QL48 77 aa9.54□□□□□ -0.88
PAF1-202ENST00000416728 PLA2G1BP04054 148 aaKnown RBP9.54□□□□□ -0.88
PAF1-202ENST00000416728 ZNF726P1Q15940 193 aa9.54□□□□□ -0.88
PAF1-202ENST00000416728 Q5BKY6 102 aa9.54□□□□□ -0.88
PAF1-202ENST00000416728 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
PAF1-202ENST00000416728 RPL7L1Q6DKI1 246 aaKnown RBP9.54□□□□□ -0.88
PAF1-202ENST00000416728 Q6ZSA8 131 aa9.54□□□□□ -0.88
PAF1-202ENST00000416728 M0R036 132 aa9.53□□□□□ -0.88
PAF1-202ENST00000416728 ARMS2P0C7Q2 107 aa9.53□□□□□ -0.88
PAF1-202ENST00000416728 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
PAF1-202ENST00000416728 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
PAF1-202ENST00000416728 HIST1H2BAQ96A08 127 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms