RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 IGKV3-11P04433 115 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 ASAH2BP0C7U1 165 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 MIFP14174 115 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 HMGN3Q15651 99 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 KPRPQ5T749 579 aaPredicted RBP3.7□□□□□ -1.82
XIST-201ENST00000416330 KRTAP7-1Q8IUC3 87 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 NXT2Q9NPJ8 142 aaKnown RBP3.7□□□□□ -1.82
XIST-201ENST00000416330 KLK12Q9UKR0 248 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 SMAD5-AS1Q9Y6J3 95 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 S4R3C0 116 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 KIDINS220Q9ULH0 1771 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 NUP214P35658 2090 aaPredicted RBP3.7□□□□□ -1.82
XIST-201ENST00000416330 NOTCH3Q9UM47 2321 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 SCN1AP35498 2009 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 KIF20BQ96Q89 1820 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 MEGF6O75095 1541 aa3.7□□□□□ -1.82
XIST-201ENST00000416330 TRAV10A0A0B4J240 114 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 HCG22E2RYF7 251 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 SYS1-DBNDD2H3BUS1 97 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 H3BUT2 72 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 ERC2-IT1O76042 136 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 TFF1P04155 84 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 SPATA45Q537H7 98 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 Q8TAT8 98 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 CMTM2Q8TAZ6 248 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 NDUFB11Q9NX14 153 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 ARHGEF12Q9NZN5 1544 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 HFM1A2PYH4 1435 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 ANKARQ7Z5J8 1434 aa3.69□□□□□ -1.82
XIST-201ENST00000416330 TRAV13-2A0A0B4J235 113 aa3.68□□□□□ -1.82
XIST-201ENST00000416330 MUC21A0A140T8X8 626 aa3.68□□□□□ -1.82
XIST-201ENST00000416330 TCRBV4S1A1TA0A5B7 111 aa3.68□□□□□ -1.82
XIST-201ENST00000416330 ODF3BA8MYP8 253 aa3.68□□□□□ -1.82
XIST-201ENST00000416330 ZNF791Q3KP31 576 aaPredicted RBP3.68□□□□□ -1.82
XIST-201ENST00000416330 PRO0461Q9UI25 63 aa3.68□□□□□ -1.82
XIST-201ENST00000416330 UGGT2Q9NYU1 1516 aa3.68□□□□□ -1.82
XIST-201ENST00000416330 TOPAZ1Q8N9V7 1692 aa3.68□□□□□ -1.82
XIST-201ENST00000416330 COL1A2P08123 1366 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 MPV17LQ2QL34 196 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 LYPD5Q6UWN5 251 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 HIGD1BQ9P298 99 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 LCTP09848 1927 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 EDC4Q6P2E9 1401 aaKnown RBP3.67□□□□□ -1.82
XIST-201ENST00000416330 SHANK3Q9BYB0 1731 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 ANK1P16157 1881 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 PXDNQ92626 1479 aa3.67□□□□□ -1.82
XIST-201ENST00000416330 CDK12Q9NYV4 1490 aaPredicted RBP3.67□□□□□ -1.82
XIST-201ENST00000416330 PPLO60437 1756 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 CASZ1Q86V15 1759 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 TRBV10-3A0A0K0K1G6 114 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 NDUFC1O43677 76 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 ZNF79Q15937 498 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 MGAMO43451 1857 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 DOCK1Q14185 1865 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 NCOA2Q15596 1464 aa3.66□□□□□ -1.82
XIST-201ENST00000416330 SNRNP200O75643 2136 aaKnown RBP3.65□□□□□ -1.82
XIST-201ENST00000416330 THADAQ6YHU6 1953 aa3.65□□□□□ -1.82
XIST-201ENST00000416330 MALRD1Q5VYJ5 2156 aa3.65□□□□□ -1.82
XIST-201ENST00000416330 TMSB15BA0A087X1C1 80 aa3.65□□□□□ -1.83
XIST-201ENST00000416330 CXCL8P10145 99 aa3.65□□□□□ -1.83
XIST-201ENST00000416330 CLECL1Q8IZS7 167 aa3.65□□□□□ -1.83
XIST-201ENST00000416330 C18orf32Q8TCD1 76 aa3.65□□□□□ -1.83
XIST-201ENST00000416330 CYP4F30PQ9H0H9 118 aa3.65□□□□□ -1.83
XIST-201ENST00000416330 AGRNO00468 2067 aa3.65□□□□□ -1.83
XIST-201ENST00000416330 MYH8P13535 1937 aa3.65□□□□□ -1.83
XIST-201ENST00000416330 CCDC180Q9P1Z9 1646 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 KANTRA0A1W2PQU2 76 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 CYP2G1PQ6ZSU1 146 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 C9orf163Q8N9P6 203 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 ODF3Q96PU9 254 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 LHFPL6Q9Y693 200 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 DISP1Q96F81 1524 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 ABCA7Q8IZY2 2146 aa3.64□□□□□ -1.83
XIST-201ENST00000416330 LRP5O75197 1615 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 PLXNA4Q9HCM2 1894 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 PTPRMP28827 1452 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 SHANK2Q9UPX8 1470 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 TRAV12-1A0A0B4J245 112 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 NDPQ00604 133 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 LINC00483Q53H64 154 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 MAPK1IP1LQ8NDC0 245 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 RPS10P5Q9NQ39 176 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 MANBALQ9NQG1 85 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 SLIT3O75094 1523 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 ARHGAP21Q5T5U3 1957 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 KIAA1549Q9HCM3 1950 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 ZNF318Q5VUA4 2279 aa3.63□□□□□ -1.83
XIST-201ENST00000416330 KIF14Q15058 1648 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 IGLV3-16A0A075B6K0 115 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 A0A0G2JND7 137 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 CXorf51AA0A1B0GTR3 108 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 ERHP84090 104 aaKnown RBP3.62□□□□□ -1.83
XIST-201ENST00000416330 PMCHL1Q16048 86 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 MRGPRG-AS1Q2M3A8 158 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 HIGD2AQ9BW72 106 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 GFRA4Q9GZZ7 299 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 R4GN34 69 aa3.62□□□□□ -1.83
XIST-201ENST00000416330 TMEM131LA2VDJ0 1609 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms