RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NTN5Q8WTR8 489 aaPredicted RBP10.16□□□□□ -0.78
SCN1B-202ENST00000415950 F8W1H4 67 aa10.16□□□□□ -0.78
SCN1B-202ENST00000415950 K7EM74 188 aa10.16□□□□□ -0.78
SCN1B-202ENST00000415950 GNLYP22749 145 aa10.16□□□□□ -0.78
SCN1B-202ENST00000415950 HAMPP81172 84 aa10.16□□□□□ -0.78
SCN1B-202ENST00000415950 ZNF491Q8N8L2 437 aa10.16□□□□□ -0.78
SCN1B-202ENST00000415950 OR11H6Q8NGC7 330 aa10.16□□□□□ -0.78
SCN1B-202ENST00000415950 FAM215AQ9Y5M1 114 aa10.16□□□□□ -0.78
SCN1B-202ENST00000415950 IGF2BP2-AS1Q96M15 143 aa10.15□□□□□ -0.78
SCN1B-202ENST00000415950 C12orf74Q32Q52 190 aa10.15□□□□□ -0.78
SCN1B-202ENST00000415950 TNRC6AQ8NDV7 1962 aaKnown RBP10.15□□□□□ -0.78
SCN1B-202ENST00000415950 C2orf70A6NJV1 201 aa10.15□□□□□ -0.78
SCN1B-202ENST00000415950 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.78
SCN1B-202ENST00000415950 LTAP01374 205 aa10.15□□□□□ -0.79
SCN1B-202ENST00000415950 POU2AF1Q16633 256 aa10.15□□□□□ -0.79
SCN1B-202ENST00000415950 CEND1Q8N111 149 aa10.15□□□□□ -0.79
SCN1B-202ENST00000415950 IGKV1-17P01599 117 aa10.14□□□□□ -0.79
SCN1B-202ENST00000415950 DAZAP2Q15038 168 aaPredicted RBP10.14□□□□□ -0.79
SCN1B-202ENST00000415950 A0A1W2PNU3 283 aaPredicted RBP10.14□□□□□ -0.79
SCN1B-202ENST00000415950 B5MCH6 92 aa10.14□□□□□ -0.79
SCN1B-202ENST00000415950 J3QQQ9 107 aa10.14□□□□□ -0.79
SCN1B-202ENST00000415950 FXYD2P54710 66 aa10.14□□□□□ -0.79
SCN1B-202ENST00000415950 PRSS33Q8NF86 280 aa10.14□□□□□ -0.79
SCN1B-202ENST00000415950 TINCRA0A1B0GVN0 87 aa10.14□□□□□ -0.79
SCN1B-202ENST00000415950 WFDC2Q14508 124 aa10.14□□□□□ -0.79
SCN1B-202ENST00000415950 MTORP42345 2549 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 PRSS29PA6NIE9 313 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 IGLV2-8P01709 118 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 ATP6V0BQ99437 205 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 PRB1P04280 392 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 P0C879 139 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 GATA4P43694 442 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 FAM110DQ8TAY7 271 aaPredicted RBP10.13□□□□□ -0.79
SCN1B-202ENST00000415950 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 CELSR3Q9NYQ7 3312 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 POLQO75417 2590 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 H3BRN7 92 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 FOXE3Q13461 319 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 KLF5Q13887 457 aaPredicted RBP10.13□□□□□ -0.79
SCN1B-202ENST00000415950 CARD19Q96LW7 228 aa10.13□□□□□ -0.79
SCN1B-202ENST00000415950 FAM223BA6NKX1 122 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 FAM223AQ8IWN6 122 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 TMEM190Q8WZ59 177 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 WDFY4Q6ZS81 3184 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 SOCS3O14543 225 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 GNRH2O43555 120 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 DEFB1P60022 68 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 GAGE6Q13070 117 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 DYNAPQ8N1N2 210 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 DKK4Q9UBT3 224 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 TRBV25-1A0A075B6N4 114 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 I3L3M4 83 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 GAGE7O76087 117 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 THAP8Q8NA92 274 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 WIPF2Q8TF74 440 aaPredicted RBP10.12□□□□□ -0.79
SCN1B-202ENST00000415950 AGPAT4-IT1Q9H0P7 198 aa10.12□□□□□ -0.79
SCN1B-202ENST00000415950 IGHV1OR15-1A0A075B7D0 117 aa10.11□□□□□ -0.79
SCN1B-202ENST00000415950 GP9P14770 177 aa10.11□□□□□ -0.79
SCN1B-202ENST00000415950 A0A096LPF7 62 aa10.11□□□□□ -0.79
SCN1B-202ENST00000415950 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
SCN1B-202ENST00000415950 SCRT2Q9NQ03 307 aa10.11□□□□□ -0.79
SCN1B-202ENST00000415950 CRYBA4P53673 196 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 SS18Q15532 418 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 IFITM1P13164 125 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 SPATA12Q7Z6I5 190 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 DNAH14Q0VDD8 3507 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 INAFM2P0DMQ5 153 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 UBE2E1P51965 193 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 GRNP28799 593 aaKnown RBP10.1□□□□□ -0.79
SCN1B-202ENST00000415950 LINC00310P59036 64 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
SCN1B-202ENST00000415950 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
SCN1B-202ENST00000415950 TMEM14CQ9P0S9 112 aa10.09□□□□□ -0.79
SCN1B-202ENST00000415950 RNF223E7ERA6 249 aa10.09□□□□□ -0.79
SCN1B-202ENST00000415950 CLPSL2Q6UWE3 100 aa10.09□□□□□ -0.79
SCN1B-202ENST00000415950 C22orf34Q6ZV56 151 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 C1QTNF4Q9BXJ3 329 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 LHBP01229 141 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 CFHR4Q92496 578 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 TMEM131Q92545 1883 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 PRAC2D3DTV9 90 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 SS18L2Q9UHA2 77 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 TRAV25A0A0B4J276 109 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 RHODO00212 210 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
SCN1B-202ENST00000415950 RPL39LQ96EH5 51 aaKnown RBP10.07□□□□□ -0.8
SCN1B-202ENST00000415950 F5H768 121 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 K7EIM0 57 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 LRRK2Q5S007 2527 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 CFC1BP0CG36 223 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 CFC1P0CG37 223 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 DEFB121Q5J5C9 76 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 C3orf56Q8N813 242 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 IGKV1D-37A0A075B6S9 117 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 MSMBP08118 114 aa10.06□□□□□ -0.8
SCN1B-202ENST00000415950 CTRLP40313 264 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms