RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 CLLU1Q5K131 121 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 SCIMPQ6UWF3 145 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 LINC00575Q6W349 94 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 ATP11AUNQ6ZP68 121 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 SNX29P2Q8IUI4 249 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 ARL17AQ8IVW1 177 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 DMAC1Q96GE9 116 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 TMEM191AQ9H0A3 160 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 SAR1AQ9NR31 198 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 ERG28Q9UKR5 140 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 BOKQ9UMX3 212 aaPredicted RBP0.47□□□□□ -2.33
ATG4C-204ENST00000414558 LSM2Q9Y333 95 aaKnown RBP0.47□□□□□ -2.33
ATG4C-204ENST00000414558 NOP16Q9Y3C1 178 aaKnown RBP0.47□□□□□ -2.33
ATG4C-204ENST00000414558 ASH1LQ9NR48 2969 aaKnown RBP0.47□□□□□ -2.33
ATG4C-204ENST00000414558 NCOA3Q9Y6Q9 1424 aa0.47□□□□□ -2.33
ATG4C-204ENST00000414558 RIMS1Q86UR5 1692 aaKnown RBP0.46□□□□□ -2.34
ATG4C-204ENST00000414558 PLXNA1Q9UIW2 1896 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 MAP2P11137 1827 aaKnown RBP0.46□□□□□ -2.34
ATG4C-204ENST00000414558 PARP14Q460N5 1801 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 TRAV23DV6A0A075B6W5 121 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 A0A0G2JMM0 328 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 NUPR2A6NF83 97 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 ZNF670-ZNF695F2Z2N8 137 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 CCDC179H3BU77 68 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 K7EP13 123 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 KLF7O75840 302 aaPredicted RBP0.46□□□□□ -2.34
ATG4C-204ENST00000414558 LINC00694P0DN24 101 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 GUCA1AP43080 201 aaPredicted RBP0.46□□□□□ -2.34
ATG4C-204ENST00000414558 RPL37AP61513 92 aaKnown RBP0.46□□□□□ -2.34
ATG4C-204ENST00000414558 SELENOWP63302 87 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 RHOHQ15669 191 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 UNQ5815/PRO19632Q6UWF5 114 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 SLC25A26Q70HW3 274 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 NDUFA11Q86Y39 141 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 VSTM2AQ8TAG5 236 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 DYNLRB2Q8TF09 96 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 COPS9Q8WXC6 57 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 ARL11Q969Q4 196 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 LIMD2Q9BT23 127 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 WFDC10AQ9H1F0 79 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 MRPL35Q9NZE8 188 aaKnown RBP0.46□□□□□ -2.34
ATG4C-204ENST00000414558 CCDC167Q9P0B6 97 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 FAM135AQ9P2D6 1515 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 NWD2Q9ULI1 1742 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 CUL7Q14999 1698 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 DAPK1P53355 1430 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 NAIPQ13075 1403 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 KDM6BO15054 1643 aa0.46□□□□□ -2.34
ATG4C-204ENST00000414558 TRBV10-1A0A0K0K1A3 114 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 FAM236AA0A1B0GUQ0 79 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 FAM236BA0A1B0GV22 79 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 FAM92AA1XBS5 289 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 HIGD1CA8MV81 97 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 APOC1P02654 83 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 PYYP10082 97 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 RRAS2P62070 204 aaPredicted RBP0.45□□□□□ -2.34
ATG4C-204ENST00000414558 EMX2Q04743 252 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 OCIAD2Q56VL3 154 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 LINC01545Q5VT33 79 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 CSAG1Q6PB30 78 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 LYPD5Q6UWN5 251 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 Q6ZUT4 128 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 DEFB132Q7Z7B7 95 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 TET1Q8NFU7 2136 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 PSMG3Q9BT73 122 aaPredicted RBP0.45□□□□□ -2.34
ATG4C-204ENST00000414558 LINC00470Q9BZP3 86 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 ATG5Q9H1Y0 275 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 PTPRMP28827 1452 aa0.45□□□□□ -2.34
ATG4C-204ENST00000414558 BLMP54132 1417 aaPredicted RBP0.45□□□□□ -2.34
ATG4C-204ENST00000414558 SMG6Q86US8 1419 aaKnown RBP0.45□□□□□ -2.34
ATG4C-204ENST00000414558 MUC22E2RYF6 1773 aaPredicted RBP0.45□□□□□ -2.34
ATG4C-204ENST00000414558 SNRNP200O75643 2136 aaKnown RBP0.44□□□□□ -2.34
ATG4C-204ENST00000414558 NRXN2Q9P2S2 1712 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 QRICH2Q9H0J4 1663 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 ASCC3Q8N3C0 2202 aaKnown RBP0.44□□□□□ -2.34
ATG4C-204ENST00000414558 CFTRP13569 1480 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 TRAV12-2A0A075B6T6 113 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 TRAV17A0A0B4J275 112 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 TEX49A0A1B0GTD5 131 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 FAM25AB3EWG3 89 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 FAM25CB3EWG5 89 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 FAM25GB3EWG6 89 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 APODP05090 189 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 IL7P13232 177 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 SPCS2Q15005 226 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 SPANXN1Q5VSR9 72 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 XAF1Q6GPH4 301 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 RPL13AP3Q6NVV1 102 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 Q6ZQY7 126 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 SDF2Q99470 211 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 MRPL36Q9P0J6 103 aaKnown RBP0.44□□□□□ -2.34
ATG4C-204ENST00000414558 MYH8P13535 1937 aa0.44□□□□□ -2.34
ATG4C-204ENST00000414558 CITO14578 2027 aa0.43□□□□□ -2.34
ATG4C-204ENST00000414558 PHIPQ8WWQ0 1821 aa0.43□□□□□ -2.34
ATG4C-204ENST00000414558 MBD5Q9P267 1494 aa0.43□□□□□ -2.34
ATG4C-204ENST00000414558 SIPA1L3O60292 1781 aaPredicted RBP0.43□□□□□ -2.34
ATG4C-204ENST00000414558 TCHHQ07283 1943 aa0.43□□□□□ -2.34
ATG4C-204ENST00000414558 CXorf51AA0A1B0GTR3 108 aa0.43□□□□□ -2.34
ATG4C-204ENST00000414558 M0R129 80 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms