RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 ZFAND3Q9H8U3 227 aa10□□□□□ -0.81
LITAF-203ENST00000413364 ZFYVE26Q68DK2 2539 aa10□□□□□ -0.81
LITAF-203ENST00000413364 SPG11Q96JI7 2443 aa10□□□□□ -0.81
LITAF-203ENST00000413364 CLEC19AQ6UXS0 136 aa10□□□□□ -0.81
LITAF-203ENST00000413364 ZNF462Q96JM2 2506 aa10□□□□□ -0.81
LITAF-203ENST00000413364 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
LITAF-203ENST00000413364 IGHV3-35A0A0C4DH35 117 aa9.99□□□□□ -0.81
LITAF-203ENST00000413364 CIARTQ8N365 385 aaPredicted RBP9.99□□□□□ -0.81
LITAF-203ENST00000413364 RASL10AQ92737 203 aa9.99□□□□□ -0.81
LITAF-203ENST00000413364 H3BUX3 64 aa9.99□□□□□ -0.81
LITAF-203ENST00000413364 J3KT08 172 aa9.99□□□□□ -0.81
LITAF-203ENST00000413364 M0R3E3 92 aa9.99□□□□□ -0.81
LITAF-203ENST00000413364 SMAD5-AS1Q9Y6J3 95 aa9.99□□□□□ -0.81
LITAF-203ENST00000413364 IGHV3OR16-8A0A075B7F1 116 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 FAM223BA6NKX1 122 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 AVPP01185 164 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 IGF1P05019 195 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 COL8A1P27658 744 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 LY6EQ16553 131 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 FAM223AQ8IWN6 122 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 A0A096LNT2 108 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 A0A1B0GX51 115 aa9.98□□□□□ -0.81
LITAF-203ENST00000413364 Q71RC1 249 aaPredicted RBP9.98□□□□□ -0.81
LITAF-203ENST00000413364 ZNF785A8K8V0 405 aa9.97□□□□□ -0.81
LITAF-203ENST00000413364 HAX1O00165 279 aa9.97□□□□□ -0.81
LITAF-203ENST00000413364 LINC01356Q8N9X3 169 aa9.97□□□□□ -0.81
LITAF-203ENST00000413364 TMEM158Q8WZ71 300 aa9.97□□□□□ -0.81
LITAF-203ENST00000413364 LINC00527Q9UJ94 153 aa9.97□□□□□ -0.81
LITAF-203ENST00000413364 TRAV4A0A0B4J268 109 aa9.96□□□□□ -0.81
LITAF-203ENST00000413364 CLPSL1A2RUU4 121 aa9.96□□□□□ -0.81
LITAF-203ENST00000413364 A8MWV9 139 aa9.96□□□□□ -0.81
LITAF-203ENST00000413364 IGHG2P01859 326 aa9.96□□□□□ -0.81
LITAF-203ENST00000413364 MRAPQ8TCY5 172 aa9.96□□□□□ -0.81
LITAF-203ENST00000413364 BUB3O43684 328 aa9.96□□□□□ -0.82
LITAF-203ENST00000413364 TRGV3P03979 118 aa9.96□□□□□ -0.82
LITAF-203ENST00000413364 SBSPONQ8IVN8 264 aa9.96□□□□□ -0.82
LITAF-203ENST00000413364 IFI27L1Q96BM0 104 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 SPANXDQ9BXN6 97 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 F8WDY8 70 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 LINC01619G3V211 115 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 H3BUA1 57 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 HOXA3O43365 443 aaPredicted RBP9.95□□□□□ -0.82
LITAF-203ENST00000413364 HBDP02042 147 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 LINC00694P0DN24 101 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 PRB4P10163 310 aaPredicted RBP9.95□□□□□ -0.82
LITAF-203ENST00000413364 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 LINC01587Q99440 93 aa9.95□□□□□ -0.82
LITAF-203ENST00000413364 UBR5O95071 2799 aaPredicted RBP9.95□□□□□ -0.82
LITAF-203ENST00000413364 J3QLI3 93 aa9.94□□□□□ -0.82
LITAF-203ENST00000413364 RPS28P62857 69 aaKnown RBP9.94□□□□□ -0.82
LITAF-203ENST00000413364 FAM19A5Q7Z5A7 132 aaPredicted RBP9.94□□□□□ -0.82
LITAF-203ENST00000413364 METTL26Q96S19 204 aa9.94□□□□□ -0.82
LITAF-203ENST00000413364 ASCL2Q99929 193 aa9.94□□□□□ -0.82
LITAF-203ENST00000413364 IGKV2-40A0A087WW87 121 aaPredicted RBP9.94□□□□□ -0.82
LITAF-203ENST00000413364 A0A096LNJ9 63 aa9.94□□□□□ -0.82
LITAF-203ENST00000413364 C9JAW5 83 aa9.94□□□□□ -0.82
LITAF-203ENST00000413364 IGKV2D-40P01614 121 aaPredicted RBP9.94□□□□□ -0.82
LITAF-203ENST00000413364 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
LITAF-203ENST00000413364 U3KQE9 123 aa9.94□□□□□ -0.82
LITAF-203ENST00000413364 CRIP1P50238 77 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 BLCAPP62952 87 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 LINC01559Q495D7 138 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 C8orf49Q96NF6 230 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 FAM208BQ5VWN6 2430 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 SCGB1C2P0DMR2 95 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
LITAF-203ENST00000413364 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 GATD1Q8NB37 220 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 USMG5Q96IX5 58 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
LITAF-203ENST00000413364 UTP20O75691 2785 aaKnown RBP9.92□□□□□ -0.82
LITAF-203ENST00000413364 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.92□□□□□ -0.822e-6■■□□□ 13.8
LITAF-203ENST00000413364 IGHV3-66A0A0C4DH42 116 aa9.92□□□□□ -0.82
LITAF-203ENST00000413364 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
LITAF-203ENST00000413364 PSMB2P49721 201 aa9.92□□□□□ -0.82
LITAF-203ENST00000413364 LOXL1Q08397 574 aaPredicted RBP9.92□□□□□ -0.82
LITAF-203ENST00000413364 IGFL4Q6B9Z1 124 aa9.92□□□□□ -0.82
LITAF-203ENST00000413364 LRRK2Q5S007 2527 aa9.92□□□□□ -0.82
LITAF-203ENST00000413364 KRTAP10-9P60411 292 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 MORN3Q6PF18 240 aaPredicted RBP9.91□□□□□ -0.82
LITAF-203ENST00000413364 SLC50A1Q9BRV3 221 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 BEX4Q9NWD9 120 aaPredicted RBP9.91□□□□□ -0.82
LITAF-203ENST00000413364 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 TRAV8-2A0A0B4J237 113 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 F5H768 121 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 DEFB112Q30KQ8 113 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 Q6ZS46 218 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 PRR25Q96S07 402 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 PRADC1Q9BSG0 188 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 HHLA3Q9XRX5 114 aa9.91□□□□□ -0.82
LITAF-203ENST00000413364 KMT2BQ9UMN6 2715 aaPredicted RBP9.91□□□□□ -0.82
LITAF-203ENST00000413364 IGHV3OR16-13A0A075B7E8 117 aa9.9□□□□□ -0.82
LITAF-203ENST00000413364 IGHV3-74A0A0B4J1X5 117 aa9.9□□□□□ -0.82
LITAF-203ENST00000413364 DUSP14O95147 198 aaKnown RBP9.9□□□□□ -0.82
LITAF-203ENST00000413364 RIGQ13278 110 aa9.9□□□□□ -0.82
LITAF-203ENST00000413364 ZNF580Q9UK33 172 aa9.9□□□□□ -0.82
LITAF-203ENST00000413364 IGHV3-49A0A0A0MS15 119 aa9.9□□□□□ -0.83
LITAF-203ENST00000413364 RNF223E7ERA6 249 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms