RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 X6R8D5 127 aa7.36□□□□□ -1.23
LINC01643-201ENST00000412218 GRIFINA4D1Z8 144 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 TMEM189A5PLL7 270 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 H3BMM0 161 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 SH2D1AO60880 128 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 RBMY1A1P0DJD3 496 aaKnown RBP7.35□□□□□ -1.23
LINC01643-201ENST00000412218 RBMY1CP0DJD4 496 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 HLA-DRB4P13762 266 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 HLA-DMBP28068 263 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 RBMY1FQ15415 496 aaKnown RBP7.35□□□□□ -1.23
LINC01643-201ENST00000412218 TMEM78Q5T7P6 136 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 GATD1Q8NB37 220 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 PGLYRP4Q96LB8 373 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 C8orf49Q96NF6 230 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 PPP1R14DQ9NXH3 145 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 LENEPQ9Y5L5 61 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 HLA-DRB4X5D2U9 266 aa7.35□□□□□ -1.23
LINC01643-201ENST00000412218 TRAV8-2A0A0B4J237 113 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 A0A1B0GUT8 65 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 SRIP30626 198 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 CAMPP49913 170 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 ZNF138P52744 262 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 PYY3Q5JQD4 70 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 GDF5OSQ5U4N7 250 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 VGLL1Q99990 258 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 C1QTNF4Q9BXJ3 329 aa7.34□□□□□ -1.23
LINC01643-201ENST00000412218 FABP5P3A8MUU1 101 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF705FA8MVS1 300 aaPredicted RBP7.33□□□□□ -1.24
LINC01643-201ENST00000412218 SERF1AO75920 110 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 ID1P41134 155 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 CRIP1P50238 77 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 DEFB1P60022 68 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 NUTF2P61970 127 aaKnown RBP7.33□□□□□ -1.24
LINC01643-201ENST00000412218 HIST1H1AQ02539 215 aaPredicted RBP7.33□□□□□ -1.24
LINC01643-201ENST00000412218 SLAQ13239 276 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 JOSD1Q15040 202 aaPredicted RBP7.33□□□□□ -1.24
LINC01643-201ENST00000412218 IGFL4Q6B9Z1 124 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 FOXI2Q6ZQN5 318 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 C9orf47Q6ZRZ4 202 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 TMEM256Q8N2U0 113 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 RNF182Q8N6D2 247 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF738Q8NE65 137 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 Q8TAT8 98 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 KCNS1Q96KK3 526 aa7.33□□□□□ -1.24
LINC01643-201ENST00000412218 BIRC6Q9NR09 4857 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 PRAC2D3DTV9 90 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 GZMBP10144 247 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 CTRLP40313 264 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 KIAA1644Q3SXP7 199 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 LINC01559Q495D7 138 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 LGALS9CQ6DKI2 356 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 OR10J6PQ8NGY7 276 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 CLUHP3Q96NS8 147 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 SAMD10Q9BYL1 202 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 XCL2Q9UBD3 114 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 TP53TG3Q9ULZ0 132 aa7.32□□□□□ -1.24
LINC01643-201ENST00000412218 TRBV7-9A0A0J9YWB2 115 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 PCP4L1A6NKN8 68 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 IGKV3-20P01619 116 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 TCTAP57738 103 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 ERCC8Q13216 396 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 IQCJQ1A5X6 159 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF705AQ6ZN79 300 aaPredicted RBP7.31□□□□□ -1.24
LINC01643-201ENST00000412218 Q6ZTC4 211 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 FER1L6-AS1Q8NA97 138 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 C18orf32Q8TCD1 76 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 C20orf173Q96LM9 149 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 LINC00477Q96M19 166 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 ALKBH7Q9BT30 221 aaPredicted RBP7.31□□□□□ -1.24
LINC01643-201ENST00000412218 AGPAT4-IT1Q9H0P7 198 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 CELA1Q9UNI1 258 aa7.31□□□□□ -1.24
LINC01643-201ENST00000412218 A0A0J9YX75 114 aa7.3□□□□□ -1.24
LINC01643-201ENST00000412218 F6UB75 175 aa7.3□□□□□ -1.24
LINC01643-201ENST00000412218 ARMS2P0C7Q2 107 aa7.3□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF705DP0CH99 300 aaPredicted RBP7.3□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF705BP0CI00 300 aaPredicted RBP7.3□□□□□ -1.24
LINC01643-201ENST00000412218 FXYD7P58549 80 aa7.3□□□□□ -1.24
LINC01643-201ENST00000412218 LINC00310P59036 64 aa7.3□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF493Q6ZR52 646 aa7.3□□□□□ -1.24
LINC01643-201ENST00000412218 TPPP3Q9BW30 176 aa7.3□□□□□ -1.24
LINC01643-201ENST00000412218 SSBP4Q9BWG4 385 aaPredicted RBP7.3□□□□□ -1.24
LINC01643-201ENST00000412218 TRAV10A0A0B4J240 114 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 A8MTW9 85 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 IGLL5B9A064 214 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 F2Z2F3 143 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF324O75467 553 aaPredicted RBP7.29□□□□□ -1.24
LINC01643-201ENST00000412218 ORM1P02763 201 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 IGLC6P0CF74 106 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 ZNF80P51504 273 aaPredicted RBP7.29□□□□□ -1.24
LINC01643-201ENST00000412218 C12orf74Q32Q52 190 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 EBLN2Q6P2I7 272 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 LYZL1Q6UWQ5 148 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 APLNQ9ULZ1 77 aa7.29□□□□□ -1.24
LINC01643-201ENST00000412218 TMSB15BA0A087X1C1 80 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 SMIM9A6NGZ8 99 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 NUPR1O60356 82 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 HSBP1O75506 76 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 GPX1P07203 203 aa7.28□□□□□ -1.24
LINC01643-201ENST00000412218 PRB4P10163 310 aaPredicted RBP7.28□□□□□ -1.24
LINC01643-201ENST00000412218 RAB4AP20338 218 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms