RNA–Protein interactions for RNA: ENST00000411243.1

RNU4-61P-201, Transcript of RNA, U4 small nuclear 61, pseudogene, humanhuman

BASIC

Gene RNU4-61P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-61P-201ENST00000411243 SRP14P37108 136 aaKnown RBP-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 RPS5P46782 204 aaKnown RBP-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 UBE2D1P51668 147 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 RAB5BP61020 215 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 CXCR4P61073 352 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 UBE2KP61086 200 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 RRAS2P62070 204 aaPredicted RBP-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 RHOBP62745 196 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 MYL5Q02045 173 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 SYCP1Q15431 976 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 EXOC3L4Q17RC7 722 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 C10orf113Q5VZT2 155 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 HBMQ6B0K9 141 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 C3orf33Q6P1S2 294 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 TTC33Q6PID6 262 aaPredicted RBP-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 ALKAL1Q6UXT8 129 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 RUFY3Q7L099 469 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 CCDC91Q7Z6B0 441 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 C5orf38Q86SI9 138 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 FAM216BQ8N7L0 139 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 OR5AK3PQ8NH89 298 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 VSTM2AQ8TAG5 236 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 PIGXQ8TBF5 258 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 RNASEH2CQ8TDP1 164 aaKnown RBP-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 NRGNQ92686 78 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 CCDC43Q96MW1 224 aaKnown RBP-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 CIB1Q99828 191 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 STMN3Q9NZ72 180 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 VPS13AQ96RL7 3174 aa-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.99□□□□□ -2.73
RNU4-61P-201ENST00000411243 EDC4Q6P2E9 1401 aaKnown RBP-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 CEP164Q9UPV0 1460 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 TRAV8-7A0A075B6U6 113 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 TRAV2A0A0B4J234 112 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 TINCRA0A1B0GVN0 87 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 KRT87PA6NCN2 255 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 TMEM114B3SHH9 223 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 LYNX1G3V0Z9 82 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 CST4P01036 141 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 TRACP01848 142 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 TFF1P04155 84 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 LINC00614P0C842 121 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SPART-AS1P0CW21 52 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SMIM10L2AP0DMW4 78 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SMIM10L2BP0DMW5 78 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 PMCHP20382 165 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 POLR2JP52435 117 aaKnown RBP-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 AP3S2P59780 193 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 FABP9Q0Z7S8 132 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SCGB2A2Q13296 93 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 COTL1Q14019 142 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SPANXN2Q5MJ10 180 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 FKBP1CQ5VVH2 108 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 RESP18Q5W5W9 173 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 DUPD1Q68J44 220 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SCIMPQ6UWF3 145 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SSX9Q7RTT3 188 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 STAG3L4Q8TBR4 150 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 CA5BP1Q8WTZ4 195 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 MRAP2Q96G30 205 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 MYCBPQ99417 103 aaPredicted RBP-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 C11orf68Q9H3H3 251 aaKnown RBP-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 CACYBPQ9HB71 228 aaKnown RBP-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 SMPXQ9UHP9 88 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 UFC1Q9Y3C8 167 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 AP1M2Q9Y6Q5 423 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 KIF21AQ7Z4S6 1674 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 LRRC37AA6NMS7 1700 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 POLR1AO95602 1720 aaPredicted RBP-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 PKD1L3Q7Z443 1732 aa-2□□□□□ -2.73
RNU4-61P-201ENST00000411243 GRIN2AQ12879 1464 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 FAM236AA0A1B0GUQ0 79 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 UBE2L5PA0A1B0GUS4 154 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 FAM236BA0A1B0GV22 79 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 EXOC1LA0A1B0GW35 172 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 EFCAB9A8MZ26 197 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 AIPO00170 330 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 PGRMC1O00264 195 aaKnown RBP-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 FABP7O15540 132 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 IFNA5P01569 189 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 SMIM6P0DI80 62 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 SLC25A6P12236 298 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 ADCYAP1P18509 176 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 CXCL3P19876 107 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 CFL1P23528 166 aaKnown RBP-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 CDC34P49427 236 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 DYNLT3P51808 116 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 GTF2A1P52655 376 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 RAB8AP61006 207 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 B2MP61769 119 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 MLLT11Q13015 90 aaPredicted RBP-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 STK38Q15208 465 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 TRAM1Q15629 374 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 ATP6V1FQ16864 119 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 NMSQ5H8A3 153 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 BEX5Q5H9J7 111 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 CST9Q5W186 159 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 ETFRF1Q6IPR1 90 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 OR8I2Q8N0Y5 310 aa-2.01□□□□□ -2.73
RNU4-61P-201ENST00000411243 ANKRD29Q8N6D5 301 aa-2.01□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms