RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 Q9BRP9 147 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 SMIM3Q9BZL3 60 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 OR2J1Q9GZK6 312 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 BAIAP2Q9UQB8 552 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 CYSLTR1Q9Y271 337 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 ARFGEF2Q9Y6D5 1785 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 AKAP13Q12802 2813 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 VPS13CQ709C8 3753 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 BTAF1O14981 1849 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 CHD3Q12873 2000 aaKnown RBP1.05□□□□□ -2.24
CUL3-203ENST00000409096 PPLO60437 1756 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 IGHV1-58A0A0C4DH39 117 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 LOC107984640A0A0U1RRK4 108 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 GRIFINA4D1Z8 144 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 MEIS3P1A6NDR6 274 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 ZNF727A8MUV8 499 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 C9JCJ5 164 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 J3QR89 54 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 IGKV1-16P04430 117 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 RPL22P35268 128 aaKnown RBP1.05□□□□□ -2.24
CUL3-203ENST00000409096 RBM11P57052 281 aaKnown RBP1.05□□□□□ -2.24
CUL3-203ENST00000409096 CCL20P78556 96 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 MSMO1Q15800 293 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 RPL22L1Q6P5R6 122 aaKnown RBP1.05□□□□□ -2.24
CUL3-203ENST00000409096 C4orf33Q8N1A6 199 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 C10orf126Q8N4M7 172 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 PPTC7Q8NI37 304 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 SMCR5Q8TEV8 140 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 ERMAPQ96PL5 475 aaPredicted RBP1.05□□□□□ -2.24
CUL3-203ENST00000409096 SNRNP25Q9BV90 132 aaKnown RBP1.05□□□□□ -2.24
CUL3-203ENST00000409096 OTORQ9NRC9 128 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 V9GYS6 101 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 ANK1P16157 1881 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 PLXNA1Q9UIW2 1896 aa1.05□□□□□ -2.24
CUL3-203ENST00000409096 ZFC3H1O60293 1989 aaKnown RBP1.05□□□□□ -2.24
CUL3-203ENST00000409096 IFT172Q9UG01 1749 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 MYLKQ15746 1914 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 TMEM235A6NFC5 223 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 OR51F1A6NGY5 319 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 H3BQF6 201 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 ZNF80P51504 273 aaPredicted RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 FOXA3P55318 350 aaPredicted RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 PLGLB1Q02325 96 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 HSD52Q0P140 79 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 LCA10Q71F78 164 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 MMGT1Q8N4V1 131 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 RPP25LQ8N5L8 163 aaKnown RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 OR51A4Q8NGJ6 313 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 NAT14Q8WUY8 206 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 ZNF625Q96I27 306 aaPredicted RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 WDR61Q9GZS3 305 aaKnown RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 CXCL16Q9H2A7 254 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 RERGLQ9H628 205 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 TAS2R8Q9NYW2 309 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 CCDC167Q9P0B6 97 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 NUP98P52948 1817 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 MALRD1Q5VYJ5 2156 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 MYH1P12882 1939 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 BAZ2BQ9UIF8 2168 aaKnown RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 SLX4Q8IY92 1834 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 TRAV9-1A0A075B6T8 112 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 A0A0D9SEW6 157 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 IRGMA1A4Y4 181 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 ZNF670-ZNF695F2Z2N8 137 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 M0R378 163 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 NDUFB2O95178 105 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 MPC2O95563 127 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 TRGC2P03986 189 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 DCDP81605 110 aaKnown RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 VMA21Q3ZAQ7 101 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 PYY3Q5JQD4 70 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 TMEM244Q5VVB8 128 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 Q6ZS52 159 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 LINC00299Q6ZSB3 139 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 RPS19BP1Q86WX3 136 aaKnown RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 GKN2Q86XP6 184 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 SPACA4Q8TDM5 124 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 CBLN4Q9NTU7 201 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 PRO2289Q9P1D8 64 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 FAM215AQ9Y5M1 114 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 MYH8P13535 1937 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 KTN1Q86UP2 1357 aaKnown RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 TNRC6BQ9UPQ9 1833 aaKnown RBP1.04□□□□□ -2.24
CUL3-203ENST00000409096 PTPRDP23468 1912 aa1.04□□□□□ -2.24
CUL3-203ENST00000409096 TRBV20OR9-2A0A075B6H5 130 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 TRAV41A0A0B4J266 112 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 SPAARA0A1B0GVQ0 90 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 DPRXA6NFQ7 191 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 ZNF860A6NHJ4 632 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 GABARAPH6UMI1 98 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 OR2T1O43869 369 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 SRP19P09132 144 aaKnown RBP1.03□□□□□ -2.24
CUL3-203ENST00000409096 AKAIN1P0CW23 69 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 INSL3P51460 131 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 C6orf52Q5T4I8 152 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 BCL2L15Q5TBC7 163 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 LYRM7Q5U5X0 104 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 SNX29P2Q8IUI4 249 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 DOT1LQ8TEK3 1739 aa1.03□□□□□ -2.24
CUL3-203ENST00000409096 BORCS8Q96FH0 119 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms