RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 PTH2Q96A98 100 aa11.84□□□□□ -0.51
HMGA1P7-201ENST00000406908 SCRT2Q9NQ03 307 aa11.84□□□□□ -0.51
HMGA1P7-201ENST00000406908 CSMD3Q7Z407 3707 aa11.83□□□□□ -0.52
HMGA1P7-201ENST00000406908 F5H768 121 aa11.83□□□□□ -0.52
HMGA1P7-201ENST00000406908 GZMBP10144 247 aa11.83□□□□□ -0.52
HMGA1P7-201ENST00000406908 RPL23P62829 140 aaKnown RBP11.83□□□□□ -0.52
HMGA1P7-201ENST00000406908 POM121L12Q8N7R1 296 aa11.83□□□□□ -0.52
HMGA1P7-201ENST00000406908 NAT8Q9UHE5 227 aa11.83□□□□□ -0.52
HMGA1P7-201ENST00000406908 KLK5Q9Y337 293 aaPredicted RBP11.83□□□□□ -0.52
HMGA1P7-201ENST00000406908 LINC00862A6NCI5 91 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 IGLL5B9A064 214 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 IGHV3-53P01767 116 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 MED14OSP0DP75 135 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 HOXA5P20719 270 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 RPS20P60866 119 aaKnown RBP11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 FAM231DQ6ZW35 169 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 COMMD7Q86VX2 200 aa11.82□□□□□ -0.52
HMGA1P7-201ENST00000406908 DMRTA1Q5VZB9 504 aa11.81□□□□□ -0.52
HMGA1P7-201ENST00000406908 SSBP4Q9BWG4 385 aaPredicted RBP11.81□□□□□ -0.52
HMGA1P7-201ENST00000406908 RPP21Q9H633 154 aaKnown RBP11.81□□□□□ -0.52
HMGA1P7-201ENST00000406908 PHLDA3Q9Y5J5 127 aa11.81□□□□□ -0.52
HMGA1P7-201ENST00000406908 SNAI2O43623 268 aa11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 GATCO43716 136 aaKnown RBP11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 IGLC6P0CF74 106 aa11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 ERVFC1-1P60608 527 aa11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 ADIRFQ15847 76 aa11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 UQCC3Q6UW78 93 aa11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 ISOC2Q96AB3 205 aa11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 ZNF479Q96JC4 524 aa11.8□□□□□ -0.52
HMGA1P7-201ENST00000406908 IGHV4-4A0A075B6R2 117 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 TRAV4A0A0B4J268 109 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 MUC21A0A0G2JKD1 596 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 MUC21A0A140T8X8 626 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 RS1O15537 224 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 FHL2Q14192 279 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 PIK3CD-AS1Q5SR53 167 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 TMEM88Q6PEY1 159 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 OR4C5Q8NGB2 326 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 OR10AG1Q8NH19 301 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 JPT2Q9H910 190 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 OSTCQ9NRP0 149 aa11.79□□□□□ -0.52
HMGA1P7-201ENST00000406908 XKRY2A2RUG3 117 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 M0R381 172 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 OR5AL1P0C617 328 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 CFAP126Q5VTH2 177 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 FER1L6-AS1Q8NA97 138 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 APLNQ9ULZ1 77 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 NACAE9PAV3 2078 aa11.78□□□□□ -0.52
HMGA1P7-201ENST00000406908 TMEM218A2RU14 115 aa11.77□□□□□ -0.53
HMGA1P7-201ENST00000406908 SSTP61278 116 aa11.77□□□□□ -0.53
HMGA1P7-201ENST00000406908 ZFP82Q8N141 532 aa11.77□□□□□ -0.53
HMGA1P7-201ENST00000406908 TPPP3Q9BW30 176 aa11.77□□□□□ -0.53
HMGA1P7-201ENST00000406908 TRAV26-1A0A087WT03 109 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 A0A0J9YY99 117 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 NXPH4O95158 308 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 SFRP2Q96HF1 295 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 VSIG2Q96IQ7 327 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 SAMD10Q9BYL1 202 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 V9GYV3 84 aa11.76□□□□□ -0.53
HMGA1P7-201ENST00000406908 IGHV3-73A0A0B4J1V6 119 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 TRGV4A0A0C4DH28 118 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 A0A1W2PPQ1 181 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 A8MWL6 223 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 A8MWV9 139 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 ADCYAP1P18509 176 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 CT83Q5H943 113 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 SPANXN1Q5VSR9 72 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 LYZL1Q6UWQ5 148 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 C15orf54Q8N8G6 183 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 OR10G8Q8NGN5 311 aa11.75□□□□□ -0.53
HMGA1P7-201ENST00000406908 F2Z2F3 143 aa11.74□□□□□ -0.53
HMGA1P7-201ENST00000406908 TCTAP57738 103 aa11.74□□□□□ -0.53
HMGA1P7-201ENST00000406908 PRO0255Q9UI72 69 aa11.74□□□□□ -0.53
HMGA1P7-201ENST00000406908 HHLA3Q9XRX5 114 aa11.74□□□□□ -0.53
HMGA1P7-201ENST00000406908 TENM2Q9NT68 2774 aa11.73□□□□□ -0.53
HMGA1P7-201ENST00000406908 CRYGDP07320 174 aa11.73□□□□□ -0.53
HMGA1P7-201ENST00000406908 CTRLP40313 264 aa11.73□□□□□ -0.53
HMGA1P7-201ENST00000406908 CRYBA4P53673 196 aa11.73□□□□□ -0.53
HMGA1P7-201ENST00000406908 TSKUQ8WUA8 353 aa11.73□□□□□ -0.53
HMGA1P7-201ENST00000406908 MSRB1Q9NZV6 116 aa11.73□□□□□ -0.53
HMGA1P7-201ENST00000406908 A0A087WWL8 130 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 F8W036 122 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 PAX4O43316 350 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 CIDEAO60543 219 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 CACNG7P62955 275 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 PNRC1Q12796 327 aaPredicted RBP11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 SLAQ13239 276 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 UFSP1Q6NVU6 142 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 Q6ZSN1 163 aa11.72□□□□□ -0.53
HMGA1P7-201ENST00000406908 H3BNG1 76 aa11.71□□□□□ -0.53
HMGA1P7-201ENST00000406908 NUDT3O95989 172 aa11.71□□□□□ -0.53
HMGA1P7-201ENST00000406908 GATA1P15976 413 aaPredicted RBP11.71□□□□□ -0.53
HMGA1P7-201ENST00000406908 WDR73Q6P4I2 378 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms