RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CCL25O15444 150 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 CD5LO43866 347 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 AZU1P20160 251 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 SLURP1P55000 103 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 ASPHD1Q5U4P2 390 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 C3orf56Q8N813 242 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 ZFAND3Q9H8U3 227 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 NHP2Q9NX24 153 aaKnown RBP3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 TNCP24821 2201 aa3.64□□□□□ -1.83
PCDH11X-207ENST00000406881 UTRNP46939 3433 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 TRAV2A0A0B4J234 112 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 APOMO95445 188 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 HLA-DRB4P13762 266 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 DNAJC30Q96LL9 226 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 HLA-DRB4X5D2U9 266 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 TLN1Q9Y490 2541 aaKnown RBP3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 IGF2RP11717 2491 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 GNRH2O43555 120 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 COX8AP10176 69 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 BOD1L2Q8IYS8 172 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 STPG4Q8N801 248 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 TOMM7Q9P0U1 55 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 SPTBN4Q9H254 2564 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 A0A087WX48 190 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 CLPSL1A2RUU4 121 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 LINC01548A6NM66 108 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 SIVA1O15304 175 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 CRXO43186 299 aaPredicted RBP3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 MPV17L2Q567V2 206 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 UNQ9165/PRO28630Q6UXU0 137 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 YPEL4Q96NS1 127 aa3.63□□□□□ -1.83
PCDH11X-207ENST00000406881 A0A0J9YX75 114 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 BRI3O95415 125 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 IGHV3-53P01767 116 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 TIMM21Q9BVV7 248 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 EPG5Q9HCE0 2579 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 KIR2DL5BA0A0G2JN68 375 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 KIR2DL5BA0A0G2JPC4 375 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 RBMY1BA6NDE4 496 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 RBMY1EA6NEQ0 496 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 VWC2LB2RUY7 222 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 RBMY1DP0C7P1 496 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 RBMY1A1P0DJD3 496 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 RBMY1CP0DJD4 496 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 IGLL1P15814 213 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 MALP21145 153 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 TAL2Q16559 108 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 NEGR1Q7Z3B1 354 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 KIR2DL5AQ8N109 375 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 ZNF479Q96JC4 524 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 CHAC1Q9BUX1 264 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 ZNF580Q9UK33 172 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 ARFGEF3Q5TH69 2177 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 TRBV25-1A0A075B6N4 114 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 TRAV26-2A0A0B4J265 109 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 DNAL4O96015 105 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 GHRHP01286 108 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 TRBV12-3P01733 135 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 CRPP02741 224 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 DEFB136Q30KP8 78 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 PSMG3-AS1Q96PY0 264 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 NAA38Q9BRA0 125 aaKnown RBP3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 DNAJC9-AS1A6NH13 148 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 K7EQG2 157 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 IGLC6P0CF74 106 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 Q6ZVH6 145 aa3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 PHLDA1Q8WV24 401 aaPredicted RBP3.62□□□□□ -1.83
PCDH11X-207ENST00000406881 INSL3P51460 131 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 SS18Q15532 418 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 SAMD5Q5TGI4 173 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 LINC01545Q5VT33 79 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 OR13C6PQ8NH95 151 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 ERG28Q9UKR5 140 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE12JA6NER3 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 DEFB130BP0DP73 79 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 DEFB130AP0DP74 79 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 DAD1P61803 113 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE4Q13068 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE5Q13069 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE13Q4V321 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 SVIPQ8NHG7 77 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 ZNRF2Q8NHG8 242 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 C16orf74Q96GX8 76 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 SPANXA1Q9NS26 97 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 U3KQE9 123 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 JMJD1CQ15652 2540 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 HIVEP2P31629 2446 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 NUPR1O60356 82 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE7O76087 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE12FP0CL80 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE12GP0CL81 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 GAGE12IP0CL82 117 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 MSRB1Q9NZV6 116 aa3.61□□□□□ -1.83
PCDH11X-207ENST00000406881 TEX48A0A1B0GUV7 120 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms