RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 SPATA12Q7Z6I5 190 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 SMR3AQ99954 134 aa18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 NXT2Q9NPJ8 142 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-206ENST00000406659 TRAV12-2A0A075B6T6 113 aa18.34■□□□□ 0.53
DNMT3A-206ENST00000406659 HILS1P60008 231 aa18.34■□□□□ 0.53
DNMT3A-206ENST00000406659 SPINK13Q1W4C9 94 aa18.34■□□□□ 0.53
DNMT3A-206ENST00000406659 CCL24O00175 119 aa18.33■□□□□ 0.53
DNMT3A-206ENST00000406659 CD7P09564 240 aa18.33■□□□□ 0.53
DNMT3A-206ENST00000406659 DEFB114Q30KQ6 69 aa18.33■□□□□ 0.53
DNMT3A-206ENST00000406659 PET117Q6UWS5 81 aa18.33■□□□□ 0.53
DNMT3A-206ENST00000406659 MRAP2Q96G30 205 aa18.33■□□□□ 0.53
DNMT3A-206ENST00000406659 TSSC4Q9Y5U2 329 aaPredicted RBP18.33■□□□□ 0.53
DNMT3A-206ENST00000406659 FASNP49327 2511 aaKnown RBP18.33■□□□□ 0.52
DNMT3A-206ENST00000406659 KNCNA6PVL3 124 aa18.32■□□□□ 0.52
DNMT3A-206ENST00000406659 CITED2Q99967 270 aaPredicted RBP18.32■□□□□ 0.52
DNMT3A-206ENST00000406659 ZNF747Q9BV97 191 aa18.32■□□□□ 0.52
DNMT3A-206ENST00000406659 TRAV26-2A0A0B4J265 109 aa18.32■□□□□ 0.52
DNMT3A-206ENST00000406659 CTAG1AP78358 180 aa18.32■□□□□ 0.52
DNMT3A-206ENST00000406659 DPH3P1Q9H4G8 78 aa18.32■□□□□ 0.52
DNMT3A-206ENST00000406659 A0A096LNJ9 63 aa18.31■□□□□ 0.52
DNMT3A-206ENST00000406659 HBDP02042 147 aa18.31■□□□□ 0.52
DNMT3A-206ENST00000406659 FHL3Q13643 280 aa18.31■□□□□ 0.52
DNMT3A-206ENST00000406659 AMTNQ6UX39 209 aa18.31■□□□□ 0.52
DNMT3A-206ENST00000406659 ZNF705AQ6ZN79 300 aaPredicted RBP18.31■□□□□ 0.52
DNMT3A-206ENST00000406659 MIEN1Q9BRT3 115 aa18.31■□□□□ 0.52
DNMT3A-206ENST00000406659 C14orf178Q8N769 122 aaPredicted RBP18.3■□□□□ 0.52
DNMT3A-206ENST00000406659 NRACQ8N912 160 aa18.3■□□□□ 0.52
DNMT3A-206ENST00000406659 TRAV9-2A0A087WT02 112 aa18.3■□□□□ 0.52
DNMT3A-206ENST00000406659 LINC01546A6NGU7 62 aa18.3■□□□□ 0.52
DNMT3A-206ENST00000406659 LY6G6DO95868 133 aa18.3■□□□□ 0.52
DNMT3A-206ENST00000406659 AP1S3Q96PC3 154 aa18.3■□□□□ 0.52
DNMT3A-206ENST00000406659 OR4C46A6NHA9 309 aa18.29■□□□□ 0.52
DNMT3A-206ENST00000406659 H0Y8G0 127 aa18.29■□□□□ 0.52
DNMT3A-206ENST00000406659 NXPH4O95158 308 aa18.29■□□□□ 0.52
DNMT3A-206ENST00000406659 FXYD7P58549 80 aa18.29■□□□□ 0.52
DNMT3A-206ENST00000406659 CD300EQ496F6 205 aaPredicted RBP18.29■□□□□ 0.52
DNMT3A-206ENST00000406659 Q8N8P6 123 aa18.29■□□□□ 0.52
DNMT3A-206ENST00000406659 AGRNO00468 2067 aa18.28■□□□□ 0.52
DNMT3A-206ENST00000406659 IGHV1OR15-1A0A075B7D0 117 aa18.28■□□□□ 0.52
DNMT3A-206ENST00000406659 HLA-DRB4P13762 266 aa18.28■□□□□ 0.52
DNMT3A-206ENST00000406659 JMJD8Q96S16 334 aa18.28■□□□□ 0.52
DNMT3A-206ENST00000406659 HLA-DRB4X5D2U9 266 aa18.28■□□□□ 0.52
DNMT3A-206ENST00000406659 PRSS47A8MTI9 375 aa18.27■□□□□ 0.52
DNMT3A-206ENST00000406659 HECTD1Q9ULT8 2610 aa18.27■□□□□ 0.51
DNMT3A-206ENST00000406659 SORL1Q92673 2214 aa18.27■□□□□ 0.51
DNMT3A-206ENST00000406659 ANK3Q12955 4377 aaKnown RBP18.27■□□□□ 0.51
DNMT3A-206ENST00000406659 H3BMM0 161 aa18.27■□□□□ 0.51
DNMT3A-206ENST00000406659 MGPP08493 103 aa18.27■□□□□ 0.51
DNMT3A-206ENST00000406659 SPAG8Q99932 426 aaPredicted RBP18.27■□□□□ 0.51
DNMT3A-206ENST00000406659 IGHV3-16A0A0C4DH30 117 aa18.26■□□□□ 0.51
DNMT3A-206ENST00000406659 NDUFA7O95182 113 aa18.26■□□□□ 0.51
DNMT3A-206ENST00000406659 MAJINQ3KP22 176 aa18.26■□□□□ 0.51
DNMT3A-206ENST00000406659 MAP6D1Q9H9H5 199 aa18.26■□□□□ 0.51
DNMT3A-206ENST00000406659 TRAV25A0A0B4J276 109 aa18.25■□□□□ 0.51
DNMT3A-206ENST00000406659 DEFB125Q8N687 156 aa18.25■□□□□ 0.51
DNMT3A-206ENST00000406659 NF1P21359 2839 aa18.25■□□□□ 0.51
DNMT3A-206ENST00000406659 A8MTW9 85 aa18.25■□□□□ 0.51
DNMT3A-206ENST00000406659 SMIM17P0DL12 118 aa18.25■□□□□ 0.51
DNMT3A-206ENST00000406659 FCER1GP30273 86 aa18.25■□□□□ 0.51
DNMT3A-206ENST00000406659 IGLV2-18A0A075B6J9 118 aa18.24■□□□□ 0.51
DNMT3A-206ENST00000406659 LINC01545Q5VT33 79 aa18.24■□□□□ 0.51
DNMT3A-206ENST00000406659 Q8N1Y9 231 aa18.24■□□□□ 0.51
DNMT3A-206ENST00000406659 C9orf85Q96MD7 179 aa18.24■□□□□ 0.51
DNMT3A-206ENST00000406659 MCRIP2Q9BUT9 160 aaKnown RBP18.24■□□□□ 0.51
DNMT3A-206ENST00000406659 ZNF124Q15973 351 aa18.23■□□□□ 0.51
DNMT3A-206ENST00000406659 MTORP42345 2549 aa18.23■□□□□ 0.51
DNMT3A-206ENST00000406659 MDFICQ9P1T7 246 aa18.22■□□□□ 0.51
DNMT3A-206ENST00000406659 IGLC3P0DOY3 106 aa18.22■□□□□ 0.51
DNMT3A-206ENST00000406659 SYT8Q8NBV8 401 aa18.22■□□□□ 0.51
DNMT3A-206ENST00000406659 RASL10AQ92737 203 aa18.22■□□□□ 0.51
DNMT3A-206ENST00000406659 IFI27L1Q96BM0 104 aa18.22■□□□□ 0.51
DNMT3A-206ENST00000406659 ZNF256Q9Y2P7 627 aaPredicted RBP18.22■□□□□ 0.51
DNMT3A-206ENST00000406659 MUC4Q99102 2169 aa18.22■□□□□ 0.51
DNMT3A-206ENST00000406659 UQCR10Q9UDW1 63 aa18.21■□□□□ 0.51
DNMT3A-206ENST00000406659 HIVEP2P31629 2446 aa18.21■□□□□ 0.51
DNMT3A-206ENST00000406659 TRGV11A0A075B6L2 103 aa18.2■□□□□ 0.5
DNMT3A-206ENST00000406659 IGLL1P15814 213 aa18.2■□□□□ 0.5
DNMT3A-206ENST00000406659 RBMY1BA6NDE4 496 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 RBMY1EA6NEQ0 496 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 HSBP1L1C9JCN9 74 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 RBMY1DP0C7P1 496 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 LAGE3Q14657 143 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 POM121L12Q8N7R1 296 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 PMCHL2Q9BQD1 86 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 C20orf78Q9BR46 151 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 KIF25-AS1Q9Y6Z4 181 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 PPP1R17O96001 155 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 TMEM158Q8WZ71 300 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 SMIM2Q9BVW6 85 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 JPT2Q9H910 190 aa18.19■□□□□ 0.5
DNMT3A-206ENST00000406659 CBY3A6NI87 242 aa18.18■□□□□ 0.5
DNMT3A-206ENST00000406659 PROK1P58294 105 aa18.18■□□□□ 0.5
DNMT3A-206ENST00000406659 SUMO2P61956 95 aaKnown RBP18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 RPL39LQ96EH5 51 aaKnown RBP18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 hDV102S1A0JD36 115 aa18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 TCAPO15273 167 aa18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 RBMY1A1P0DJD3 496 aaKnown RBP18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 RBMY1CP0DJD4 496 aa18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 LINC00315P59091 139 aa18.17■□□□□ 0.5
DNMT3A-206ENST00000406659 RBMY1FQ15415 496 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms