RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 PMCHL1Q16048 86 aa12.04□□□□□ -0.48
PARVB-203ENST00000404989 DPH3P1Q9H4G8 78 aa12.04□□□□□ -0.48
PARVB-203ENST00000404989 NXT2Q9NPJ8 142 aaKnown RBP12.04□□□□□ -0.48
PARVB-203ENST00000404989 HIVEP2P31629 2446 aa12.04□□□□□ -0.48
PARVB-203ENST00000404989 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 H3BMM0 161 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 NXPH4O95158 308 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 CD7P09564 240 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 IFI27P40305 119 aaPredicted RBP12.03□□□□□ -0.48
PARVB-203ENST00000404989 CLUHP3Q96NS8 147 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 AP1S3Q96PC3 154 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 TMEM70Q9BUB7 260 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 MAP6D1Q9H9H5 199 aa12.03□□□□□ -0.48
PARVB-203ENST00000404989 ZNF256Q9Y2P7 627 aaPredicted RBP12.03□□□□□ -0.48
PARVB-203ENST00000404989 TRGV11A0A075B6L2 103 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 LOC389332A0A1B0GUA5 103 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 SMKR1H3BMG3 65 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 M0R381 172 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 SPRY2O43597 315 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 TNFRSF6BO95407 300 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 SPINK13Q1W4C9 94 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 NF1P21359 2839 aa12.02□□□□□ -0.49
PARVB-203ENST00000404989 TRAV12-2A0A075B6T6 113 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 C20orf202A1L168 122 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 PRSS47A8MTI9 375 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 NCR2O95944 276 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 PPP1R17O96001 155 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 ZNF124Q15973 351 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 DEFB125Q8N687 156 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 OR2K2Q8NGT1 345 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 MAP1LC3CQ9BXW4 147 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 SORL1Q92673 2214 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 MTORP42345 2549 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 RBMY1BA6NDE4 496 aaKnown RBP12.01□□□□□ -0.49
PARVB-203ENST00000404989 RBMY1EA6NEQ0 496 aaKnown RBP12.01□□□□□ -0.49
PARVB-203ENST00000404989 GAS8-AS1O95177 125 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 RBMY1DP0C7P1 496 aaKnown RBP12.01□□□□□ -0.49
PARVB-203ENST00000404989 NDUFA11Q86Y39 141 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 Q8N976 141 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 SYT8Q8NBV8 401 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 VAMP8Q9BV40 100 aa12.01□□□□□ -0.49
PARVB-203ENST00000404989 LINC01546A6NGU7 62 aa12□□□□□ -0.49
PARVB-203ENST00000404989 SMIM17P0DL12 118 aa12□□□□□ -0.49
PARVB-203ENST00000404989 C20orf144Q9BQM9 153 aa12□□□□□ -0.49
PARVB-203ENST00000404989 PRO1933Q9H354 126 aa12□□□□□ -0.49
PARVB-203ENST00000404989 IGHV3-16A0A0C4DH30 117 aa11.99□□□□□ -0.49
PARVB-203ENST00000404989 CRXO43186 299 aaPredicted RBP11.99□□□□□ -0.49
PARVB-203ENST00000404989 PET117Q6UWS5 81 aa11.99□□□□□ -0.49
PARVB-203ENST00000404989 Q8N8P6 123 aa11.99□□□□□ -0.49
PARVB-203ENST00000404989 C9orf85Q96MD7 179 aa11.99□□□□□ -0.49
PARVB-203ENST00000404989 FLNBO75369 2602 aaKnown RBP11.98□□□□□ -0.49
PARVB-203ENST00000404989 MUC4Q99102 2169 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 KIR2DL5BA0A0G2JN68 375 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 KIR2DL5BA0A0G2JPC4 375 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 CRLF1O75462 422 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 HBDP02042 147 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 NSUN5P1Q3KNT7 163 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 KIR2DL5AQ8N109 375 aa11.98□□□□□ -0.49
PARVB-203ENST00000404989 SYS1-DBNDD2H3BUS1 97 aa11.97□□□□□ -0.49
PARVB-203ENST00000404989 GATA1P15976 413 aaPredicted RBP11.97□□□□□ -0.49
PARVB-203ENST00000404989 DDTP30046 118 aa11.97□□□□□ -0.49
PARVB-203ENST00000404989 FXYD7P58549 80 aa11.97□□□□□ -0.49
PARVB-203ENST00000404989 POM121L12Q8N7R1 296 aa11.97□□□□□ -0.49
PARVB-203ENST00000404989 OR11H12B2RN74 326 aa11.96□□□□□ -0.49
PARVB-203ENST00000404989 RBMY1A1P0DJD3 496 aaKnown RBP11.96□□□□□ -0.49
PARVB-203ENST00000404989 RBMY1CP0DJD4 496 aa11.96□□□□□ -0.49
PARVB-203ENST00000404989 RBMY1FQ15415 496 aaKnown RBP11.96□□□□□ -0.49
PARVB-203ENST00000404989 ODF3L2Q3SX64 289 aa11.96□□□□□ -0.49
PARVB-203ENST00000404989 Q8N1Y9 231 aa11.96□□□□□ -0.49
PARVB-203ENST00000404989 C14orf178Q8N769 122 aaPredicted RBP11.96□□□□□ -0.49
PARVB-203ENST00000404989 NRACQ8N912 160 aa11.96□□□□□ -0.49
PARVB-203ENST00000404989 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
PARVB-203ENST00000404989 SAP30O75446 220 aa11.96□□□□□ -0.5
PARVB-203ENST00000404989 FAM110AQ9BQ89 295 aa11.96□□□□□ -0.5
PARVB-203ENST00000404989 LINC00467Q9BRT7 94 aa11.96□□□□□ -0.5
PARVB-203ENST00000404989 ZNF747Q9BV97 191 aa11.96□□□□□ -0.5
PARVB-203ENST00000404989 CBY3A6NI87 242 aa11.95□□□□□ -0.5
PARVB-203ENST00000404989 MGPP08493 103 aa11.95□□□□□ -0.5
PARVB-203ENST00000404989 LINC00173Q6ZV60 143 aa11.95□□□□□ -0.5
PARVB-203ENST00000404989 SPATA12Q7Z6I5 190 aa11.95□□□□□ -0.5
PARVB-203ENST00000404989 STHQ8IWL8 128 aa11.95□□□□□ -0.5
PARVB-203ENST00000404989 K7EMI3 77 aa11.94□□□□□ -0.5
PARVB-203ENST00000404989 INSP01308 110 aa11.94□□□□□ -0.5
PARVB-203ENST00000404989 FCER1GP30273 86 aa11.94□□□□□ -0.5
PARVB-203ENST00000404989 DEFA6Q01524 100 aa11.94□□□□□ -0.5
PARVB-203ENST00000404989 MDFICQ9P1T7 246 aa11.94□□□□□ -0.5
PARVB-203ENST00000404989 NOTCH2Q04721 2471 aa11.94□□□□□ -0.5
PARVB-203ENST00000404989 IGLV1-51P01701 117 aa11.93□□□□□ -0.5
PARVB-203ENST00000404989 NUTF2P61970 127 aaKnown RBP11.93□□□□□ -0.5
PARVB-203ENST00000404989 PAM16Q9Y3D7 125 aa11.93□□□□□ -0.5
PARVB-203ENST00000404989 KIF25-AS1Q9Y6Z4 181 aa11.93□□□□□ -0.5
PARVB-203ENST00000404989 FN1P02751 2386 aaKnown RBP11.93□□□□□ -0.5
PARVB-203ENST00000404989 IGLV2-18A0A075B6J9 118 aa11.92□□□□□ -0.5
PARVB-203ENST00000404989 TRAV9-2A0A087WT02 112 aa11.92□□□□□ -0.5
PARVB-203ENST00000404989 A0A096LNJ9 63 aa11.92□□□□□ -0.5
PARVB-203ENST00000404989 TRAV26-2A0A0B4J265 109 aa11.92□□□□□ -0.5
PARVB-203ENST00000404989 SETXQ7Z333 2677 aaKnown RBP11.92□□□□□ -0.5
PARVB-203ENST00000404989 WNK1Q9H4A3 2382 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms