RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 Q6ZQT7 251 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 Q8N1X5 172 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 C6orf223Q8N319 242 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 TP53TG3Q9ULZ0 132 aa12.55□□□□□ -0.4
HDAC11-204ENST00000404040 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
HDAC11-204ENST00000404040 SH2D1AO60880 128 aa12.54□□□□□ -0.4
HDAC11-204ENST00000404040 ORM1P02763 201 aa12.54□□□□□ -0.4
HDAC11-204ENST00000404040 MGST1P10620 155 aaKnown RBP12.54□□□□□ -0.4
HDAC11-204ENST00000404040 C11orf72Q8NBR9 251 aa12.54□□□□□ -0.4
HDAC11-204ENST00000404040 ZNRF2Q8NHG8 242 aa12.54□□□□□ -0.4
HDAC11-204ENST00000404040 DAZAP1Q96EP5 407 aaKnown RBP12.54□□□□□ -0.4
HDAC11-204ENST00000404040 SPXQ9BT56 116 aa12.54□□□□□ -0.4
HDAC11-204ENST00000404040 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
HDAC11-204ENST00000404040 DMBT1Q9UGM3 2413 aaPredicted RBP12.54□□□□□ -0.4
HDAC11-204ENST00000404040 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 B4DEV8 164 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 TYMSP04818 313 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 CRIP1P50238 77 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 LINC01559Q495D7 138 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 PRR27Q6MZM9 219 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
HDAC11-204ENST00000404040 GSN-AS1Q9NRJ2 163 aa12.53□□□□□ -0.4
HDAC11-204ENST00000404040 TRBV20OR9-2A0A075B6H5 130 aa12.52□□□□□ -0.41
HDAC11-204ENST00000404040 IGHV3-16A0A0C4DH30 117 aa12.51□□□□□ -0.41
HDAC11-204ENST00000404040 GNRH2O43555 120 aa12.51□□□□□ -0.41
HDAC11-204ENST00000404040 IGLV2-8P01709 118 aa12.51□□□□□ -0.41
HDAC11-204ENST00000404040 S100A4P26447 101 aaKnown RBP12.51□□□□□ -0.41
HDAC11-204ENST00000404040 ASIPP42127 132 aa12.51□□□□□ -0.41
HDAC11-204ENST00000404040 C11orf21Q9P2W6 132 aa12.51□□□□□ -0.41
HDAC11-204ENST00000404040 IGKV3D-20A0A0C4DH25 116 aa12.5□□□□□ -0.41
HDAC11-204ENST00000404040 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
HDAC11-204ENST00000404040 CXCL1P09341 107 aa12.5□□□□□ -0.41
HDAC11-204ENST00000404040 OR5I1Q13606 314 aa12.5□□□□□ -0.41
HDAC11-204ENST00000404040 DNLZQ5SXM8 178 aa12.5□□□□□ -0.41
HDAC11-204ENST00000404040 SCRT2Q9NQ03 307 aa12.5□□□□□ -0.41
HDAC11-204ENST00000404040 MDFICQ9P1T7 246 aa12.5□□□□□ -0.41
HDAC11-204ENST00000404040 XKRY2A2RUG3 117 aa12.49□□□□□ -0.41
HDAC11-204ENST00000404040 M0R036 132 aa12.49□□□□□ -0.41
HDAC11-204ENST00000404040 SPINK4O60575 86 aa12.49□□□□□ -0.41
HDAC11-204ENST00000404040 DEFB130BP0DP73 79 aa12.49□□□□□ -0.41
HDAC11-204ENST00000404040 DEFB130AP0DP74 79 aa12.49□□□□□ -0.41
HDAC11-204ENST00000404040 RPS20P60866 119 aaKnown RBP12.49□□□□□ -0.41
HDAC11-204ENST00000404040 UQCC3Q6UW78 93 aa12.49□□□□□ -0.41
HDAC11-204ENST00000404040 OCC1Q8TAD7 63 aa12.49□□□□□ -0.41
HDAC11-204ENST00000404040 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 PGPEP1LA6NFU8 196 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 M0R2P5 195 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 P01737 135 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 SRSF3P84103 164 aaKnown RBP12.48□□□□□ -0.41
HDAC11-204ENST00000404040 TMEM241Q24JQ0 296 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 LINC00612Q8N6U2 182 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 C18orf15Q96N68 181 aa12.48□□□□□ -0.41
HDAC11-204ENST00000404040 C19orf71A6NCJ1 209 aa12.47□□□□□ -0.41
HDAC11-204ENST00000404040 NUDT3O95989 172 aa12.47□□□□□ -0.41
HDAC11-204ENST00000404040 IL36BQ9NZH7 164 aa12.47□□□□□ -0.41
HDAC11-204ENST00000404040 NAT8Q9UHE5 227 aa12.47□□□□□ -0.41
HDAC11-204ENST00000404040 LINC00588Q9Y4M8 146 aa12.47□□□□□ -0.41
HDAC11-204ENST00000404040 TRGV2A0A075B6R0 118 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 C9JQL5 133 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 F5H768 121 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 GAGE7O76087 117 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 ATP5G1P05496 136 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 GAGE12FP0CL80 117 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 GAGE12GP0CL81 117 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 GAGE12IP0CL82 117 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 CCL18P55774 89 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 RASL10AQ92737 203 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 PTH2Q96A98 100 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 C9orf85Q96MD7 179 aa12.46□□□□□ -0.41
HDAC11-204ENST00000404040 PIK3CD-AS1Q5SR53 167 aa12.45□□□□□ -0.42
HDAC11-204ENST00000404040 Q6ZTI0 123 aa12.45□□□□□ -0.42
HDAC11-204ENST00000404040 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
HDAC11-204ENST00000404040 LINC01551Q86U37 167 aa12.45□□□□□ -0.42
HDAC11-204ENST00000404040 OR2D3Q8NGH3 330 aa12.45□□□□□ -0.42
HDAC11-204ENST00000404040 TMSB15BA0A087X1C1 80 aa12.44□□□□□ -0.42
HDAC11-204ENST00000404040 K7EN84 100 aa12.44□□□□□ -0.42
HDAC11-204ENST00000404040 RNASE3P12724 160 aaKnown RBP12.44□□□□□ -0.42
HDAC11-204ENST00000404040 SYT8Q8NBV8 401 aa12.44□□□□□ -0.42
HDAC11-204ENST00000404040 GRIFINA4D1Z8 144 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 LINC00862A6NCI5 91 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 H3BVH4 76 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 SFTA3P0C7M3 94 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 ARMS2P0C7Q2 107 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 ERVFC1-1P60608 527 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 C15orf54Q8N8G6 183 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 KRTAP1-5Q9BYS1 174 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 RPP21Q9H633 154 aaKnown RBP12.43□□□□□ -0.42
HDAC11-204ENST00000404040 MRPL16Q9NX20 251 aaKnown RBP12.43□□□□□ -0.42
HDAC11-204ENST00000404040 PHLDA3Q9Y5J5 127 aa12.43□□□□□ -0.42
HDAC11-204ENST00000404040 CIDEAO60543 219 aa12.42□□□□□ -0.42
HDAC11-204ENST00000404040 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
HDAC11-204ENST00000404040 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
HDAC11-204ENST00000404040 COMMD7Q86VX2 200 aa12.42□□□□□ -0.42
HDAC11-204ENST00000404040 GATCO43716 136 aaKnown RBP12.41□□□□□ -0.42
HDAC11-204ENST00000404040 OR5AL1P0C617 328 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms