RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 C19orf71A6NCJ1 209 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 ZNF727A8MUV8 499 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 CIDEAO60543 219 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 P01737 135 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 RPS20P60866 119 aaKnown RBP9.62□□□□□ -0.87
VPREB1-202ENST00000403807 RPL19P84098 196 aaKnown RBP9.62□□□□□ -0.87
VPREB1-202ENST00000403807 IFITM2Q01629 132 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 PIK3CD-AS1Q5SR53 167 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 ZNF575Q86XF7 245 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 SYT8Q8NBV8 401 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 SMIM7Q9BQ49 75 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 PHLDA3Q9Y5J5 127 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 LY96Q9Y6Y9 160 aa9.62□□□□□ -0.87
VPREB1-202ENST00000403807 TRAV26-1A0A087WT03 109 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 XKRY2A2RUG3 117 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 LY6G6CO95867 125 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 SFTA3P0C7M3 94 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 MED14OSP0DP75 135 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 FHL2Q14192 279 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 CLLU1Q5K131 121 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 POM121L12Q8N7R1 296 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 OR2D3Q8NGH3 330 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 ZNF479Q96JC4 524 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 SCRT2Q9NQ03 307 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
VPREB1-202ENST00000403807 TENM2Q9NT68 2774 aa9.6□□□□□ -0.87
VPREB1-202ENST00000403807 A0A0J9YY99 117 aa9.6□□□□□ -0.87
VPREB1-202ENST00000403807 H3BNG1 76 aa9.6□□□□□ -0.87
VPREB1-202ENST00000403807 RS1O15537 224 aa9.6□□□□□ -0.87
VPREB1-202ENST00000403807 NUDT3O95989 172 aa9.6□□□□□ -0.87
VPREB1-202ENST00000403807 SRSF3P84103 164 aaKnown RBP9.6□□□□□ -0.87
VPREB1-202ENST00000403807 LINC00476Q8WZB0 136 aa9.6□□□□□ -0.87
VPREB1-202ENST00000403807 PRO0255Q9UI72 69 aa9.6□□□□□ -0.87
VPREB1-202ENST00000403807 LYSTQ99698 3801 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 A8MWV9 139 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 C9JQL5 133 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 K7EN84 100 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 PAX4O43316 350 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 P0DMU3 169 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 FAM231AP0DMU4 169 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 FAM231CP0DMU5 169 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 TMEM241Q24JQ0 296 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 CFAP126Q5VTH2 177 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 DMRTA1Q5VZB9 504 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 ZFP82Q8N141 532 aa9.59□□□□□ -0.87
VPREB1-202ENST00000403807 SSBP4Q9BWG4 385 aaPredicted RBP9.59□□□□□ -0.87
VPREB1-202ENST00000403807 SNAI2O43623 268 aa9.58□□□□□ -0.88
VPREB1-202ENST00000403807 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
VPREB1-202ENST00000403807 CRYBA4P53673 196 aa9.58□□□□□ -0.88
VPREB1-202ENST00000403807 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
VPREB1-202ENST00000403807 M0R381 172 aa9.57□□□□□ -0.88
VPREB1-202ENST00000403807 GATCO43716 136 aaKnown RBP9.57□□□□□ -0.88
VPREB1-202ENST00000403807 ERVFC1-1P60608 527 aa9.57□□□□□ -0.88
VPREB1-202ENST00000403807 SOHLH1Q5JUK2 328 aa9.57□□□□□ -0.88
VPREB1-202ENST00000403807 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
VPREB1-202ENST00000403807 FAM231DQ6ZW35 169 aa9.57□□□□□ -0.88
VPREB1-202ENST00000403807 LINC01551Q86U37 167 aa9.57□□□□□ -0.88
VPREB1-202ENST00000403807 VSIG2Q96IQ7 327 aa9.57□□□□□ -0.88
VPREB1-202ENST00000403807 RPP21Q9H633 154 aaKnown RBP9.57□□□□□ -0.88
VPREB1-202ENST00000403807 A0A1W2PPQ1 181 aa9.56□□□□□ -0.88
VPREB1-202ENST00000403807 GZMBP10144 247 aa9.56□□□□□ -0.88
VPREB1-202ENST00000403807 ZFP2Q6ZN57 461 aa9.56□□□□□ -0.88
VPREB1-202ENST00000403807 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
VPREB1-202ENST00000403807 SFRP2Q96HF1 295 aa9.56□□□□□ -0.88
VPREB1-202ENST00000403807 NAT8Q9UHE5 227 aa9.56□□□□□ -0.88
VPREB1-202ENST00000403807 MUC4Q99102 2169 aa9.56□□□□□ -0.88
VPREB1-202ENST00000403807 IGHV3-73A0A0B4J1V6 119 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 F2Z2F3 143 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 IGLC6P0CF74 106 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 GATA1P15976 413 aaPredicted RBP9.55□□□□□ -0.88
VPREB1-202ENST00000403807 CCL18P55774 89 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 RNF212Q495C1 297 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 UBE2DNLQ8IWF7 75 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 OR10AG1Q8NH19 301 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 TPPP3Q9BW30 176 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 JPT2Q9H910 190 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 ICOSQ9Y6W8 199 aa9.55□□□□□ -0.88
VPREB1-202ENST00000403807 MUC21A0A0G2JKD1 596 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 MUC21A0A140T8X8 626 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 A8MWL6 223 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 RHODO00212 210 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 SSTP61278 116 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 RPL23P62829 140 aaKnown RBP9.54□□□□□ -0.88
VPREB1-202ENST00000403807 CACNG7P62955 275 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 MRPL23Q16540 153 aaKnown RBP9.54□□□□□ -0.88
VPREB1-202ENST00000403807 C15orf54Q8N8G6 183 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 PRADC1Q9BSG0 188 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 OSTCQ9NRP0 149 aa9.54□□□□□ -0.88
VPREB1-202ENST00000403807 ALMS1Q8TCU4 4167 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 A0A096LPF7 62 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 TRBV6-4A0A1B0GX49 114 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 NXPH4O95158 308 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 GYPEP15421 78 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 ADIRFQ15847 76 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 CT83Q5H943 113 aa9.53□□□□□ -0.88
VPREB1-202ENST00000403807 FAM74A4Q5TZK3 123 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms