RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 Q1RN00 199 aa7.01□□□□□ -1.29
HPS4-203ENST00000402105 PHLDA1Q8WV24 401 aaPredicted RBP7.01□□□□□ -1.29
HPS4-203ENST00000402105 RPL39P62891 51 aaKnown RBP7.01□□□□□ -1.29
HPS4-203ENST00000402105 UNQ9165/PRO28630Q6UXU0 137 aa7.01□□□□□ -1.29
HPS4-203ENST00000402105 C20orf173Q96LM9 149 aa7.01□□□□□ -1.29
HPS4-203ENST00000402105 LGALS1P09382 135 aaKnown RBP7□□□□□ -1.29
HPS4-203ENST00000402105 C2CD3Q4AC94 2353 aa7□□□□□ -1.29
HPS4-203ENST00000402105 LINC00477Q96M19 166 aa7□□□□□ -1.29
HPS4-203ENST00000402105 ZMAT4Q9H898 229 aa7□□□□□ -1.29
HPS4-203ENST00000402105 ZFAND3Q9H8U3 227 aa7□□□□□ -1.29
HPS4-203ENST00000402105 IGLV2-18A0A075B6J9 118 aa7□□□□□ -1.29
HPS4-203ENST00000402105 ORMDL2Q53FV1 153 aa7□□□□□ -1.29
HPS4-203ENST00000402105 LY6G5BQ8NDX9 201 aa7□□□□□ -1.29
HPS4-203ENST00000402105 TP53TG1Q9Y2A0 90 aa7□□□□□ -1.29
HPS4-203ENST00000402105 A0A1B0GV72 72 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 CLPSL1A2RUU4 121 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 RASL10AQ92737 203 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 OPRPNQ99935 248 aaPredicted RBP6.99□□□□□ -1.29
HPS4-203ENST00000402105 NACAE9PAV3 2078 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 M0R1W7 72 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 FAM110DQ8TAY7 271 aaPredicted RBP6.99□□□□□ -1.29
HPS4-203ENST00000402105 BAALCQ8WXS3 180 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 CLUHP3Q96NS8 147 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 TRAV12-3A0A0B4J271 114 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 SPINK8P0C7L1 97 aa6.99□□□□□ -1.29
HPS4-203ENST00000402105 ODF3BA8MYP8 253 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 CD7P09564 240 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 NPC2P61916 151 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 ATP6V0BQ99437 205 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 BPESC1Q9GZL8 116 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 DPH3P1Q9H4G8 78 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 TRAV2A0A0B4J234 112 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 ADARB2-AS1A8MUL3 147 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 PRSS2P07478 247 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 NBL1P41271 181 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 DLX4Q92988 240 aaPredicted RBP6.98□□□□□ -1.29
HPS4-203ENST00000402105 BSNQ9UPA5 3926 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 TRAV12-2A0A075B6T6 113 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 IGHV3-73A0A0B4J1V6 119 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 TRAV21A0A0B4J279 112 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 A6NJY4 79 aa6.98□□□□□ -1.29
HPS4-203ENST00000402105 TRAV41A0A0B4J266 112 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 C11orf86A6NJI1 115 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 ZNF56Q15929 161 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 FAM159AQ6UWV7 190 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 CNFNQ9BYD5 112 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 C1orf122Q6ZSJ8 110 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 KIR2DL4Q99706 377 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 EDN2P20800 178 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 HERVK_113P61574 105 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 MORN3Q6PF18 240 aaPredicted RBP6.97□□□□□ -1.29
HPS4-203ENST00000402105 Q6ZS46 218 aa6.97□□□□□ -1.29
HPS4-203ENST00000402105 HRNRQ86YZ3 2850 aaPredicted RBP6.96□□□□□ -1.29
HPS4-203ENST00000402105 TRBV7-3A0A075B6L6 115 aa6.96□□□□□ -1.29
HPS4-203ENST00000402105 IGHV4-39P01824 125 aa6.96□□□□□ -1.29
HPS4-203ENST00000402105 MT-ATP8P03928 68 aa6.96□□□□□ -1.29
HPS4-203ENST00000402105 TRAV26-1A0A087WT03 109 aa6.96□□□□□ -1.3
HPS4-203ENST00000402105 LGALS3P17931 250 aaKnown RBP6.96□□□□□ -1.3
HPS4-203ENST00000402105 FOXI1Q12951 378 aa6.96□□□□□ -1.3
HPS4-203ENST00000402105 PSMG4Q5JS54 123 aa6.96□□□□□ -1.3
HPS4-203ENST00000402105 NEXN-AS1Q8NBZ9 246 aa6.96□□□□□ -1.3
HPS4-203ENST00000402105 MRAP2Q96G30 205 aa6.96□□□□□ -1.3
HPS4-203ENST00000402105 GEMIN7Q9H840 131 aaKnown RBP6.96□□□□□ -1.3
HPS4-203ENST00000402105 HIVEP3Q5T1R4 2406 aa6.96□□□□□ -1.3
HPS4-203ENST00000402105 TSPAN13O95857 204 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 RNASE13Q5GAN3 156 aaKnown RBP6.95□□□□□ -1.3
HPS4-203ENST00000402105 TOMM6Q96B49 74 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
HPS4-203ENST00000402105 NFE4Q86UQ8 179 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 USP9YO00507 2555 aaPredicted RBP6.95□□□□□ -1.3
HPS4-203ENST00000402105 ZFHX3Q15911 3703 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 NPFFO15130 113 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 ZNF688P0C7X2 276 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 TAL2Q16559 108 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 MINOS1Q5TGZ0 78 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 C9orf47Q6ZRZ4 202 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 DUX5Q96PT3 197 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 RHPN1-AS1Q9BWJ2 59 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 KLK9Q9UKQ9 250 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 MINOS1-NBL1R4GNA1 71 aa6.95□□□□□ -1.3
HPS4-203ENST00000402105 NOTCH2Q04721 2471 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 CENPVL3A0A0U1RRI6 287 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 C9JAW5 83 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 COX8CQ7Z4L0 72 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 Q8N6K4 173 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 A0A1W2PPR1 153 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 TRPT1Q86TN4 253 aaKnown RBP6.94□□□□□ -1.3
HPS4-203ENST00000402105 ZFAND2AQ8N6M9 145 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 SDHAF1A6NFY7 115 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 TCL1BO95988 128 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 BLCAPP62952 87 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 C9orf139Q6ZV77 190 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 PIFOQ8TCI5 191 aa6.94□□□□□ -1.3
HPS4-203ENST00000402105 SETD2Q9BYW2 2564 aaPredicted RBP6.93□□□□□ -1.3
HPS4-203ENST00000402105 UBE2E1P51965 193 aa6.93□□□□□ -1.3
HPS4-203ENST00000402105 TMEM95Q3KNT9 176 aa6.93□□□□□ -1.3
HPS4-203ENST00000402105 MYO18BQ8IUG5 2567 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms