RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 GAGE12BA1L429 117 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 K7EP34 96 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 CFHR3Q02985 330 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 OCIAD2Q56VL3 154 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 PAPPA-AS1Q5QFB9 102 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 RNASE8Q8TDE3 154 aaKnown RBP6.62□□□□□ -1.35
LINC01139-201ENST00000400946 WFDC12Q8WWY7 111 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 TOMM6Q96B49 74 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 C18orf15Q96N68 181 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 DAZ1Q9NQZ3 744 aaKnown RBP6.62□□□□□ -1.35
LINC01139-201ENST00000400946 TP73-AS1Q9UF72 201 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 PHLDA3Q9Y5J5 127 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 PTPN13Q12923 2485 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 HECTD1Q9ULT8 2610 aa6.62□□□□□ -1.35
LINC01139-201ENST00000400946 SETXQ7Z333 2677 aaKnown RBP6.62□□□□□ -1.35
LINC01139-201ENST00000400946 TRAV40A0A0B4J280 105 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 KLLNB2CW77 178 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 H3BVH4 76 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 TGFAP01135 160 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 MSMBP08118 114 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 S100A4P26447 101 aaKnown RBP6.61□□□□□ -1.35
LINC01139-201ENST00000400946 ZC2HC1BQ5TFG8 222 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 TMEM219Q86XT9 240 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 DOPEY1Q5JWR5 2465 aa6.61□□□□□ -1.35
LINC01139-201ENST00000400946 UTP20O75691 2785 aaKnown RBP6.61□□□□□ -1.35
LINC01139-201ENST00000400946 TRBV25-1A0A075B6N4 114 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 IGHV4-61A0A0C4DH41 118 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 A0A1W2PPM0 123 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 B4DSR2 109 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 C19orf84I3L1E1 186 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 ZNF207O43670 478 aaKnown RBP6.6□□□□□ -1.35
LINC01139-201ENST00000400946 GAS8-AS1O95177 125 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
LINC01139-201ENST00000400946 UNQ9165/PRO28630Q6UXU0 137 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 ERASQ7Z444 233 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 CCL19Q99731 98 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 CHAC1Q9BUX1 264 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 RHPN1-AS1Q9BWJ2 59 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 NBPF19A0A087WUL8 3843 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 ABCA4P78363 2273 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 IGHV3OR16-13A0A075B7E8 117 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 IGHV3-49A0A0A0MS15 119 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 IGHV3-74A0A0B4J1X5 117 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 J3QLI3 93 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 PRB4P10163 310 aaPredicted RBP6.6□□□□□ -1.35
LINC01139-201ENST00000400946 FABP2P12104 132 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 FXYD7P58549 80 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 ANXA2RQ3ZCQ2 193 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 PRR9Q5T870 116 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 CEND1Q8N111 149 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 NEXN-AS1Q8NBZ9 246 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 RASL10AQ92737 203 aa6.6□□□□□ -1.35
LINC01139-201ENST00000400946 MRPL35Q9NZE8 188 aaKnown RBP6.6□□□□□ -1.35
LINC01139-201ENST00000400946 IGKV2D-26A0A0A0MRZ7 120 aa6.59□□□□□ -1.35
LINC01139-201ENST00000400946 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.35
LINC01139-201ENST00000400946 H3BUX3 64 aa6.59□□□□□ -1.35
LINC01139-201ENST00000400946 ZNF479Q96JC4 524 aa6.59□□□□□ -1.35
LINC01139-201ENST00000400946 SCGB3A1Q96QR1 104 aa6.59□□□□□ -1.35
LINC01139-201ENST00000400946 SPTAN1Q13813 2472 aaKnown RBP6.58□□□□□ -1.36
LINC01139-201ENST00000400946 A0A1B0GWB2 263 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 E9PLD3 99 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 H3BUT2 72 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 RNASE3P12724 160 aaKnown RBP6.58□□□□□ -1.36
LINC01139-201ENST00000400946 ATP5J2P56134 94 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 SAMD5Q5TGI4 173 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 FAM159AQ6UWV7 190 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 BRD3OSQ6XYD6 125 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 TMEM141Q96I45 108 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 KIF25-AS1Q9Y6Z4 181 aa6.58□□□□□ -1.36
LINC01139-201ENST00000400946 SPTBN1Q01082 2364 aaKnown RBP6.58□□□□□ -1.36
LINC01139-201ENST00000400946 OR11H12B2RN74 326 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 LGALS9O00182 355 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 VCYO14598 125 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 TRBV12-3P01733 135 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 IGHV4-38-2P0DP08 117 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 GCSHP23434 173 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 PSMB8P28062 276 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 NEGR1Q7Z3B1 354 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 GTSCR1Q86UQ5 136 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 WFDC3Q8IUB2 231 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 OR11H1Q8NG94 326 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 OR11H2Q8NH07 326 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 DCANP1Q8TF63 244 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
LINC01139-201ENST00000400946 CYSLTR1Q9Y271 337 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 SPCS1Q9Y6A9 102 aa6.57□□□□□ -1.36
LINC01139-201ENST00000400946 TRAV26-2A0A0B4J265 109 aa6.56□□□□□ -1.36
LINC01139-201ENST00000400946 DUSP14O95147 198 aaKnown RBP6.56□□□□□ -1.36
LINC01139-201ENST00000400946 RNASE4P34096 147 aaKnown RBP6.56□□□□□ -1.36
LINC01139-201ENST00000400946 POLR2KP53803 58 aaKnown RBP6.56□□□□□ -1.36
LINC01139-201ENST00000400946 RIPPLY3P57055 190 aa6.56□□□□□ -1.36
LINC01139-201ENST00000400946 LINC00315P59091 139 aa6.56□□□□□ -1.36
LINC01139-201ENST00000400946 RPL11P62913 178 aaKnown RBP6.56□□□□□ -1.36
LINC01139-201ENST00000400946 C2orf66Q6UXQ4 117 aa6.56□□□□□ -1.36
LINC01139-201ENST00000400946 C14orf178Q8N769 122 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms