RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TCTE3Q8IZS6 198 aa5.81□□□□□ -1.48
USP16-202ENST00000399973 C6orf223Q8N319 242 aa5.81□□□□□ -1.48
USP16-202ENST00000399973 DNAH17Q9UFH2 4485 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 IGKV3D-20A0A0C4DH25 116 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 LOC100131303A0A0U1RQF7 123 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 GRIFINA4D1Z8 144 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 K7EQD1 137 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 FAM162BQ5T6X4 162 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 EIF5AL1Q6IS14 154 aaKnown RBP5.8□□□□□ -1.48
USP16-202ENST00000399973 Q6ZNX1 250 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 NEGR1Q7Z3B1 354 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 MBD3L1Q8WWY6 194 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 C9orf85Q96MD7 179 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 TXNDC17Q9BRA2 123 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 TCEAL7Q9BRU2 100 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 UPK3BQ9BT76 320 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 KRTAP1-5Q9BYS1 174 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 GNG13Q9P2W3 67 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 ZFP30Q9Y2G7 519 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
USP16-202ENST00000399973 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 A0A1B0GVY2 172 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 PGPEP1LA6NFU8 196 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 TEX46H3BTG2 121 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 SIVA1O15304 175 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 LTAP01374 205 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 C1QBP02746 253 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 RNASE3P12724 160 aaKnown RBP5.79□□□□□ -1.48
USP16-202ENST00000399973 LGALSLQ3ZCW2 172 aaPredicted RBP5.79□□□□□ -1.48
USP16-202ENST00000399973 CFAP126Q5VTH2 177 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 PRR27Q6MZM9 219 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 MANBALQ9NQG1 85 aa5.79□□□□□ -1.48
USP16-202ENST00000399973 KRBOX1C9JBD0 128 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 RS1O15537 224 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 GATA1P15976 413 aaPredicted RBP5.78□□□□□ -1.48
USP16-202ENST00000399973 CRIP1P50238 77 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 TNP2Q05952 138 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 RHOHQ15669 191 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 FAM74A4Q5TZK3 123 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 LYPD5Q6UWN5 251 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 WFDC10BQ8IUB3 73 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 SYT8Q8NBV8 401 aa5.78□□□□□ -1.48
USP16-202ENST00000399973 TRBV6-1A0A0K0K1D8 114 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 A8MWV9 139 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 M0R381 172 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 IFNA1P01562 189 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 S100A9P06702 114 aaKnown RBP5.77□□□□□ -1.49
USP16-202ENST00000399973 ARMS2P0C7Q2 107 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 SULT1A2P50226 295 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 RAB5CP51148 216 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 LINC00315P59091 139 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 CCL20P78556 96 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 RPL19P84098 196 aaKnown RBP5.77□□□□□ -1.49
USP16-202ENST00000399973 SLC51BQ86UW2 128 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 C9orf62Q8N4C0 152 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 SLC25A29Q8N8R3 303 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 PRADC1Q9BSG0 188 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 PARLQ9H300 379 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 IL36BQ9NZH7 164 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 PHLDA3Q9Y5J5 127 aa5.77□□□□□ -1.49
USP16-202ENST00000399973 A0A1W2PPQ1 181 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 MGST1P10620 155 aaKnown RBP5.76□□□□□ -1.49
USP16-202ENST00000399973 RPL35P42766 123 aaKnown RBP5.76□□□□□ -1.49
USP16-202ENST00000399973 ZNF674Q2M3X9 581 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 CENPWQ5EE01 88 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 COX8CQ7Z4L0 72 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 BAGE2Q86Y30 109 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 PTH2Q96A98 100 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 DERL1Q9BUN8 251 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 JPT2Q9H910 190 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 LY96Q9Y6Y9 160 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 PKD1P98161 4303 aa5.76□□□□□ -1.49
USP16-202ENST00000399973 A0A087WWL8 130 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 TRAV1-1A0A0B4J248 108 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 TRBV6-4A0A1B0GX49 114 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 GAGE12JA6NER3 117 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 CIDEAO60543 219 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 MEF2BQ02080 365 aaPredicted RBP5.75□□□□□ -1.49
USP16-202ENST00000399973 GAGE1Q13065 139 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 GAGE4Q13068 117 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 GAGE5Q13069 117 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 GAGE13Q4V321 117 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 OR10J3Q5JRS4 329 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 SH2D6Q7Z4S9 175 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 ZFP82Q8N141 532 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 C11orf52Q96A22 123 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 SAMD10Q9BYL1 202 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
USP16-202ENST00000399973 HERC2O95714 4834 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 TRAV9-2A0A087WT02 112 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 MUC21A0A0G2JKD1 596 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 MUC21A0A140T8X8 626 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 RHODO00212 210 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 BCL2P10415 239 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 EVI2AP22794 236 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 SSTP61278 116 aa5.74□□□□□ -1.49
USP16-202ENST00000399973 DNLZQ5SXM8 178 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms