RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 GTF2H5Q6ZYL4 71 aa17.3■□□□□ 0.36
RABGGTA-202ENST00000399409 KIF25-AS1Q9Y6Z4 181 aa17.3■□□□□ 0.36
RABGGTA-202ENST00000399409 TRBV25-1A0A075B6N4 114 aa17.3■□□□□ 0.36
RABGGTA-202ENST00000399409 A0A096LNT2 108 aa17.3■□□□□ 0.36
RABGGTA-202ENST00000399409 GAGE10A6NGK3 116 aa17.3■□□□□ 0.36
RABGGTA-202ENST00000399409 NRGNQ92686 78 aa17.3■□□□□ 0.36
RABGGTA-202ENST00000399409 IGHV4OR15-8A0A075B7B6 117 aa17.29■□□□□ 0.36
RABGGTA-202ENST00000399409 A0A087WW49 117 aa17.29■□□□□ 0.36
RABGGTA-202ENST00000399409 CHTOPQ9Y3Y2 248 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-202ENST00000399409 DOPEY1Q5JWR5 2465 aa17.29■□□□□ 0.36
RABGGTA-202ENST00000399409 NEXN-AS1Q8NBZ9 246 aa17.28■□□□□ 0.36
RABGGTA-202ENST00000399409 SELENOKQ9Y6D0 94 aa17.28■□□□□ 0.36
RABGGTA-202ENST00000399409 LINC01549A6NIU2 74 aa17.28■□□□□ 0.36
RABGGTA-202ENST00000399409 SNRPD3P62318 126 aaKnown RBP17.28■□□□□ 0.36
RABGGTA-202ENST00000399409 TTTY13Q9BZ97 58 aa17.28■□□□□ 0.36
RABGGTA-202ENST00000399409 SMIM13P0DJ93 91 aa17.27■□□□□ 0.36
RABGGTA-202ENST00000399409 LINC00315P59091 139 aa17.27■□□□□ 0.36
RABGGTA-202ENST00000399409 C2orf66Q6UXQ4 117 aa17.27■□□□□ 0.36
RABGGTA-202ENST00000399409 CSTL1Q9H114 145 aa17.27■□□□□ 0.36
RABGGTA-202ENST00000399409 H3BUT2 72 aa17.27■□□□□ 0.35
RABGGTA-202ENST00000399409 GCSHP23434 173 aa17.27■□□□□ 0.35
RABGGTA-202ENST00000399409 TAL2Q16559 108 aa17.26■□□□□ 0.35
RABGGTA-202ENST00000399409 LGALS9O00182 355 aa17.26■□□□□ 0.35
RABGGTA-202ENST00000399409 TGFAP01135 160 aa17.26■□□□□ 0.35
RABGGTA-202ENST00000399409 UFSP1Q6NVU6 142 aa17.26■□□□□ 0.35
RABGGTA-202ENST00000399409 CACNA1AO00555 2505 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 TRAV12-3A0A0B4J271 114 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 A0A0J9YX75 114 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 K7EQG2 157 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 ELANEP08246 267 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 LGALS1P09382 135 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 CD7P09564 240 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 TM2D2Q9BX73 214 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 VPREB3Q9UKI3 123 aa17.25■□□□□ 0.35
RABGGTA-202ENST00000399409 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■■□□□ 14.3
RABGGTA-202ENST00000399409 RBX1P62877 108 aa17.24■□□□□ 0.35
RABGGTA-202ENST00000399409 C10orf99Q6UWK7 81 aa17.24■□□□□ 0.35
RABGGTA-202ENST00000399409 JMJD8Q96S16 334 aa17.24■□□□□ 0.35
RABGGTA-202ENST00000399409 CST9LQ9H4G1 147 aa17.24■□□□□ 0.35
RABGGTA-202ENST00000399409 SVEP1Q4LDE5 3571 aa17.24■□□□□ 0.35
RABGGTA-202ENST00000399409 K7EP34 96 aa17.24■□□□□ 0.35
RABGGTA-202ENST00000399409 ZNF688P0C7X2 276 aa17.24■□□□□ 0.35
RABGGTA-202ENST00000399409 GAGE12BA1L429 117 aa17.23■□□□□ 0.35
RABGGTA-202ENST00000399409 CEND1Q8N111 149 aa17.23■□□□□ 0.35
RABGGTA-202ENST00000399409 BAALCQ8WXS3 180 aa17.23■□□□□ 0.35
RABGGTA-202ENST00000399409 COX6B1P14854 86 aa17.23■□□□□ 0.35
RABGGTA-202ENST00000399409 FXYD2P54710 66 aa17.23■□□□□ 0.35
RABGGTA-202ENST00000399409 RAB37Q96AX2 223 aa17.23■□□□□ 0.35
RABGGTA-202ENST00000399409 MAPKAPK5-AS1Q8N8E1 139 aa17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 C9orf85Q96MD7 179 aa17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 A0A1W2PPM0 123 aa17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 DUSP14O95147 198 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 FSHBP01225 129 aa17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 CDKN1BP46527 198 aa17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 SUMO4Q6EEV6 95 aa17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 CYSLTR1Q9Y271 337 aa17.22■□□□□ 0.35
RABGGTA-202ENST00000399409 IGHV3-16A0A0C4DH30 117 aa17.21■□□□□ 0.35
RABGGTA-202ENST00000399409 SYT8Q8NBV8 401 aa17.21■□□□□ 0.35
RABGGTA-202ENST00000399409 LINC01619G3V211 115 aa17.21■□□□□ 0.34
RABGGTA-202ENST00000399409 VCYO14598 125 aa17.21■□□□□ 0.34
RABGGTA-202ENST00000399409 POLR2KP53803 58 aaKnown RBP17.21■□□□□ 0.34
RABGGTA-202ENST00000399409 Q6YL49 198 aa17.21■□□□□ 0.34
RABGGTA-202ENST00000399409 OR11H12B2RN74 326 aa17.2■□□□□ 0.34
RABGGTA-202ENST00000399409 OR11H1Q8NG94 326 aa17.2■□□□□ 0.34
RABGGTA-202ENST00000399409 OR11H2Q8NH07 326 aa17.2■□□□□ 0.34
RABGGTA-202ENST00000399409 WFDC12Q8WWY7 111 aa17.2■□□□□ 0.34
RABGGTA-202ENST00000399409 UBE2E2Q96LR5 201 aa17.2■□□□□ 0.34
RABGGTA-202ENST00000399409 MUC4Q99102 2169 aa17.2■□□□□ 0.34
RABGGTA-202ENST00000399409 SYNJ2BPP57105 145 aa17.19■□□□□ 0.34
RABGGTA-202ENST00000399409 CFAP46Q8IYW2 2715 aa17.19■□□□□ 0.34
RABGGTA-202ENST00000399409 PRSS29PA6NIE9 313 aa17.19■□□□□ 0.34
RABGGTA-202ENST00000399409 OCIAD2Q56VL3 154 aa17.19■□□□□ 0.34
RABGGTA-202ENST00000399409 OR5A1Q8NGJ0 315 aa17.19■□□□□ 0.34
RABGGTA-202ENST00000399409 TRBV6-5A0A0K0K1A5 114 aa17.18■□□□□ 0.34
RABGGTA-202ENST00000399409 JPT2Q9H910 190 aa17.18■□□□□ 0.34
RABGGTA-202ENST00000399409 ZNF702PQ9H963 129 aa17.18■□□□□ 0.34
RABGGTA-202ENST00000399409 SPG11Q96JI7 2443 aa17.18■□□□□ 0.34
RABGGTA-202ENST00000399409 FABP2P12104 132 aa17.18■□□□□ 0.34
RABGGTA-202ENST00000399409 RNF152Q8N8N0 203 aa17.18■□□□□ 0.34
RABGGTA-202ENST00000399409 KIR2DL4Q99706 377 aa17.18■□□□□ 0.34
RABGGTA-202ENST00000399409 MYMXA0A1B0GTQ4 84 aa17.17■□□□□ 0.34
RABGGTA-202ENST00000399409 F5H697 171 aa17.17■□□□□ 0.34
RABGGTA-202ENST00000399409 SAMD5Q5TGI4 173 aa17.17■□□□□ 0.34
RABGGTA-202ENST00000399409 ZFP2Q6ZN57 461 aa17.17■□□□□ 0.34
RABGGTA-202ENST00000399409 IGHV1OR15-1A0A075B7D0 117 aa17.17■□□□□ 0.34
RABGGTA-202ENST00000399409 TMEM141Q96I45 108 aa17.17■□□□□ 0.34
RABGGTA-202ENST00000399409 NAA38Q9BRA0 125 aaKnown RBP17.17■□□□□ 0.34
RABGGTA-202ENST00000399409 A0A087WWL8 130 aa17.16■□□□□ 0.34
RABGGTA-202ENST00000399409 E9PLD3 99 aa17.16■□□□□ 0.34
RABGGTA-202ENST00000399409 PAPPA-AS1Q5QFB9 102 aa17.16■□□□□ 0.34
RABGGTA-202ENST00000399409 FOXI2Q6ZQN5 318 aa17.16■□□□□ 0.34
RABGGTA-202ENST00000399409 SPCS1Q9Y6A9 102 aa17.16■□□□□ 0.34
RABGGTA-202ENST00000399409 HOXD3P31249 432 aaPredicted RBP17.16■□□□□ 0.34
RABGGTA-202ENST00000399409 NEGR1Q7Z3B1 354 aa17.16■□□□□ 0.34
RABGGTA-202ENST00000399409 IGHV4-31P0DP07 118 aa17.15■□□□□ 0.34
RABGGTA-202ENST00000399409 PHLDA1Q8WV24 401 aaPredicted RBP17.15■□□□□ 0.34
RABGGTA-202ENST00000399409 TRBV27A0A0K0K1C4 114 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 IGKV3-20P01619 116 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 MAPK1IP1LQ8NDC0 245 aa17.14■□□□□ 0.33
RABGGTA-202ENST00000399409 TP53TG1Q9Y2A0 90 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms