RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 TMEM256-PLSCR3K7ERE1 68 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 INSL3P51460 131 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 FAM27E3Q08E93 113 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 DAZ2Q13117 558 aaKnown RBP7.55□□□□□ -1.2
SMAD9-203ENST00000399275 DAZ4Q86SG3 579 aaKnown RBP7.55□□□□□ -1.2
SMAD9-203ENST00000399275 DAZ1Q9NQZ3 744 aaKnown RBP7.55□□□□□ -1.2
SMAD9-203ENST00000399275 DAZ3Q9NR90 486 aaKnown RBP7.55□□□□□ -1.2
SMAD9-203ENST00000399275 SIGLEC9Q9Y336 463 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 IGHV1-3A0A0C4DH29 117 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 NDUFB1O75438 58 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 CTRLP40313 264 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 STHQ8IWL8 128 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 SND1-IT1Q9HBX3 110 aa7.55□□□□□ -1.2
SMAD9-203ENST00000399275 IGHV1-69DA0A0B4J2H0 117 aa7.54□□□□□ -1.2
SMAD9-203ENST00000399275 IGHV3-11P01762 117 aa7.54□□□□□ -1.2
SMAD9-203ENST00000399275 BSPH1Q075Z2 132 aa7.54□□□□□ -1.2
SMAD9-203ENST00000399275 FAM186AA6NE01 2351 aa7.54□□□□□ -1.2
SMAD9-203ENST00000399275 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
SMAD9-203ENST00000399275 ODF3L1Q8IXM7 274 aa7.54□□□□□ -1.2
SMAD9-203ENST00000399275 PAX8Q06710 450 aa7.54□□□□□ -1.2
SMAD9-203ENST00000399275 WI2-2373I1.2A0A1W2PRP0 233 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 MBD3L4A6NDZ8 208 aaPredicted RBP7.53□□□□□ -1.2
SMAD9-203ENST00000399275 MBD3L3A6NE82 208 aaPredicted RBP7.53□□□□□ -1.2
SMAD9-203ENST00000399275 MBD3L5A6NJ08 208 aaPredicted RBP7.53□□□□□ -1.2
SMAD9-203ENST00000399275 ZNF503Q96F45 646 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 KIAA2026Q5HYC2 2103 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 CEP250Q9BV73 2442 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 CFAP126Q5VTH2 177 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 DEFB105AQ8NG35 78 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 PRR25Q96S07 402 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 Q9HAA7 133 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 IGKV2D-26A0A0A0MRZ7 120 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 C17orf58Q2M2W7 97 aa7.53□□□□□ -1.2
SMAD9-203ENST00000399275 KLK5Q9Y337 293 aaPredicted RBP7.53□□□□□ -1.2
SMAD9-203ENST00000399275 IGHV3-53P01767 116 aa7.52□□□□□ -1.2
SMAD9-203ENST00000399275 ZNF71Q9NQZ8 489 aaPredicted RBP7.52□□□□□ -1.2
SMAD9-203ENST00000399275 Q8TCH9 128 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 DENND4CQ5VZ89 1909 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 F8WDY8 70 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 K7EM74 188 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 BPY2O14599 106 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 DEFB123Q8N688 67 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 MDS2Q8NDY4 140 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
SMAD9-203ENST00000399275 PHF3Q92576 2039 aaKnown RBP7.52□□□□□ -1.21
SMAD9-203ENST00000399275 TMEM178BH3BS89 294 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 GATA4P43694 442 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 FAM19A3Q7Z5A8 133 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 ZNF503-AS2A6NEH8 195 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 H3BRN7 92 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 FGF23Q9GZV9 251 aaPredicted RBP7.51□□□□□ -1.21
SMAD9-203ENST00000399275 TRIOBPQ9H2D6 2365 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 INTS1Q8N201 2190 aaKnown RBP7.51□□□□□ -1.21
SMAD9-203ENST00000399275 IGLV2-14P01704 120 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 P0DMU3 169 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 FAM231AP0DMU4 169 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 FAM231CP0DMU5 169 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 ZNF134P52741 427 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 CASC2Q6XLA1 102 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 TP73-AS1Q9UF72 201 aa7.51□□□□□ -1.21
SMAD9-203ENST00000399275 BUB1B-PAK6H3BSN5 160 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 COX7A2LO14548 114 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 GNLYP22749 145 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 Q6ZS92 163 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 LINC00311Q8N616 119 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 WT1-ASQ06250 92 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 MIFP14174 115 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 SPRY4Q9C004 299 aa7.5□□□□□ -1.21
SMAD9-203ENST00000399275 LRCOL1A6NCL2 159 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 Q6ZR03 302 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 ZGRF1Q86YA3 2104 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 PIK3CD-AS1Q5SR53 167 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 DAND5Q8N907 189 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 PSPHP1O15172 72 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 DKK1O94907 266 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 PLCE1Q9P212 2302 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 TRBV7-1A0A0A6YYK4 115 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 PRR4Q16378 134 aa7.49□□□□□ -1.21
SMAD9-203ENST00000399275 KIF26AQ9ULI4 1882 aaPredicted RBP7.49□□□□□ -1.21
SMAD9-203ENST00000399275 C4orf26Q17RF5 130 aa7.48□□□□□ -1.21
SMAD9-203ENST00000399275 C15orf32Q32M92 178 aa7.48□□□□□ -1.21
SMAD9-203ENST00000399275 RNASE6Q93091 150 aaKnown RBP7.48□□□□□ -1.21
SMAD9-203ENST00000399275 A0A0J9YXV3 536 aa7.48□□□□□ -1.21
SMAD9-203ENST00000399275 LOXP28300 417 aaPredicted RBP7.48□□□□□ -1.21
SMAD9-203ENST00000399275 P0C879 139 aa7.48□□□□□ -1.21
SMAD9-203ENST00000399275 IGHV4-4A0A075B6R2 117 aa7.48□□□□□ -1.21
SMAD9-203ENST00000399275 ZNF295-AS1Q8N0V1 137 aa7.48□□□□□ -1.21
SMAD9-203ENST00000399275 TMEM89A2RUT3 159 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 CRIP3Q6Q6R5 217 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 C11orf86A6NJI1 115 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 UFSP1Q6NVU6 142 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 TP53TG3Q9ULZ0 132 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 IGHV3-38A0A0C4DH36 116 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.47□□□□□ -1.21
SMAD9-203ENST00000399275 PF4P02776 101 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 FRMD6-AS1P0C7T7 363 aa7.47□□□□□ -1.21
SMAD9-203ENST00000399275 IGHV4OR15-8A0A075B7B6 117 aa7.46□□□□□ -1.21
SMAD9-203ENST00000399275 A0A087WW49 117 aa7.46□□□□□ -1.21
SMAD9-203ENST00000399275 FAM167A-AS1Q96KT0 104 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms