RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 C3orf56Q8N813 242 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 SLC25A29Q8N8R3 303 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 PTH2Q96A98 100 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 IGLV2-23P01705 113 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 RPL39P62891 51 aaKnown RBP6.72□□□□□ -1.33
CTNND1-205ENST00000399050 HERV-K104P63124 156 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 CLPSL2Q6UWE3 100 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 FAM215AQ9Y5M1 114 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 CEP250Q9BV73 2442 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 TRBV10-2A0A0K0K1G8 114 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 A0A1B0GX51 115 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 J3KT08 172 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 ATOX1O00244 68 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 CRYGCP07315 174 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 NPBQ8NG41 125 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 TP73-AS1Q9UF72 201 aa6.72□□□□□ -1.33
CTNND1-205ENST00000399050 A0A1B0GXF2 115 aa6.71□□□□□ -1.33
CTNND1-205ENST00000399050 IGLV2-8P01709 118 aa6.71□□□□□ -1.33
CTNND1-205ENST00000399050 LOXL1Q08397 574 aaPredicted RBP6.71□□□□□ -1.33
CTNND1-205ENST00000399050 A0A0J9YXV3 536 aa6.71□□□□□ -1.33
CTNND1-205ENST00000399050 CEP290O15078 2479 aa6.71□□□□□ -1.33
CTNND1-205ENST00000399050 IGLV11-55A0A075B6I3 123 aa6.71□□□□□ -1.34
CTNND1-205ENST00000399050 PRAC2D3DTV9 90 aa6.71□□□□□ -1.34
CTNND1-205ENST00000399050 E7EUB6 86 aa6.71□□□□□ -1.34
CTNND1-205ENST00000399050 NDUFS5O43920 106 aa6.71□□□□□ -1.34
CTNND1-205ENST00000399050 CLEC2BQ92478 149 aa6.71□□□□□ -1.34
CTNND1-205ENST00000399050 RNF183Q96D59 192 aa6.71□□□□□ -1.34
CTNND1-205ENST00000399050 TNRC6BQ9UPQ9 1833 aaKnown RBP6.71□□□□□ -1.34
CTNND1-205ENST00000399050 TRBV6-1A0A0K0K1D8 114 aa6.71□□□□□ -1.34
CTNND1-205ENST00000399050 NKAPP1Q8N9T2 125 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 MRPL36Q9P0J6 103 aaKnown RBP6.7□□□□□ -1.34
CTNND1-205ENST00000399050 DAND5Q8N907 189 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 U3KQE9 123 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 LGALS9O00182 355 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 IGFL3Q6UXB1 125 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 ZNF295-AS1Q8N0V1 137 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 C11orf86A6NJI1 115 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 PSCAO43653 123 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 Q6ZUT4 128 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 TP53TG3Q9ULZ0 132 aa6.7□□□□□ -1.34
CTNND1-205ENST00000399050 A0A096LPF7 62 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 TEX22C9J3V5 150 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 H3BUA1 57 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 TCL1BO95988 128 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 IGHG2P01859 326 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 PRB1P04280 392 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 CTSGP08311 255 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 RBX1P62877 108 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 F5H768 121 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 XCL1P47992 114 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 DOCK7Q96N67 2140 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 P0C879 139 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 GATA3P23771 443 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 Q6ZPA2 131 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 MT-ATP8P03928 68 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 DAD1P61803 113 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 LINC00322Q6ZN03 302 aaPredicted RBP6.69□□□□□ -1.34
CTNND1-205ENST00000399050 NDUFA11Q86Y39 141 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 PIFOQ8TCI5 191 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 IGHV7-81A0A0B4J1V7 117 aa6.69□□□□□ -1.34
CTNND1-205ENST00000399050 BUB3O43684 328 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 NBL1P41271 181 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 C16orf54Q6UWD8 224 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 MRPL23Q16540 153 aaKnown RBP6.68□□□□□ -1.34
CTNND1-205ENST00000399050 C9orf47Q6ZRZ4 202 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 SPANXB1Q9NS25 103 aaPredicted RBP6.68□□□□□ -1.34
CTNND1-205ENST00000399050 MAPK1IP1LQ8NDC0 245 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 NOP10Q9NPE3 64 aaKnown RBP6.68□□□□□ -1.34
CTNND1-205ENST00000399050 INTS1Q8N201 2190 aaKnown RBP6.68□□□□□ -1.34
CTNND1-205ENST00000399050 SND1-IT1Q9HBX3 110 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 hADV29S1A0JD25 119 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 SHANK1Q9Y566 2161 aa6.68□□□□□ -1.34
CTNND1-205ENST00000399050 ANGP03950 147 aaKnown RBP6.67□□□□□ -1.34
CTNND1-205ENST00000399050 RNF223E7ERA6 249 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 IGKV1D-37A0A075B6S9 117 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 TRAV4A0A0B4J268 109 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 H0YGX0 51 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 CRIP3Q6Q6R5 217 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 CACNA1EQ15878 2313 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 H3BT86 120 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 PSMB8P28062 276 aa6.67□□□□□ -1.34
CTNND1-205ENST00000399050 C5orf38Q86SI9 138 aa6.66□□□□□ -1.34
CTNND1-205ENST00000399050 NDUFV3P56181 108 aaKnown RBP6.66□□□□□ -1.34
CTNND1-205ENST00000399050 NUP210LQ5VU65 1888 aa6.66□□□□□ -1.34
CTNND1-205ENST00000399050 PRB2P02812 416 aaPredicted RBP6.66□□□□□ -1.34
CTNND1-205ENST00000399050 COX7B2Q8TF08 81 aa6.66□□□□□ -1.34
CTNND1-205ENST00000399050 CENPVL3A0A0U1RRI6 287 aa6.66□□□□□ -1.34
CTNND1-205ENST00000399050 TMEM61Q8N0U2 210 aa6.66□□□□□ -1.34
CTNND1-205ENST00000399050 DEFB105AQ8NG35 78 aa6.66□□□□□ -1.34
CTNND1-205ENST00000399050 CRYGBP07316 175 aa6.65□□□□□ -1.34
CTNND1-205ENST00000399050 MED14OSP0DP75 135 aa6.65□□□□□ -1.34
CTNND1-205ENST00000399050 BRWD1-AS2P59051 145 aa6.65□□□□□ -1.34
CTNND1-205ENST00000399050 K7EQD1 137 aa6.65□□□□□ -1.34
CTNND1-205ENST00000399050 Q71RC1 249 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-205ENST00000399050 NFE4Q86UQ8 179 aa6.65□□□□□ -1.35
CTNND1-205ENST00000399050 Q8N1Y9 231 aa6.65□□□□□ -1.35
CTNND1-205ENST00000399050 IGHV4-4A0A075B6R2 117 aa6.65□□□□□ -1.35
CTNND1-205ENST00000399050 Q6ZQT7 251 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms