RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 RASL10AQ92737 203 aa10.37□□□□□ -0.75
PRAME-202ENST00000398743 UBE2E2Q96LR5 201 aa10.37□□□□□ -0.75
PRAME-202ENST00000398743 IGHV4OR15-8A0A075B7B6 117 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 A0A087WW49 117 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 NXPH4O95158 308 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 IGKCP01834 107 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 OR9G4Q8NGQ1 327 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 ODF3Q96PU9 254 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 K7EQG2 157 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 ORMDL2Q53FV1 153 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 WFDC12Q8WWY7 111 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 CSPG4Q6UVK1 2322 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 ZANQ9Y493 2812 aa10.36□□□□□ -0.75
PRAME-202ENST00000398743 TRAV12-3A0A0B4J271 114 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 A0A0J9YX75 114 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 PPP1R17O96001 155 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 HOXD3P31249 432 aaPredicted RBP10.35□□□□□ -0.75
PRAME-202ENST00000398743 RPL39LQ96EH5 51 aaKnown RBP10.35□□□□□ -0.75
PRAME-202ENST00000398743 HHLA3Q9XRX5 114 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 C7orf71A4D174 169 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 K7EMI3 77 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 SIVA1O15304 175 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 DPM2O94777 84 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 TMEM97Q5BJF2 176 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 RNF152Q8N8N0 203 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 CENPEQ02224 2701 aa10.35□□□□□ -0.75
PRAME-202ENST00000398743 POLQO75417 2590 aa10.34□□□□□ -0.75
PRAME-202ENST00000398743 CD7P09564 240 aa10.34□□□□□ -0.75
PRAME-202ENST00000398743 POM121L12Q8N7R1 296 aa10.34□□□□□ -0.75
PRAME-202ENST00000398743 DUX5Q96PT3 197 aa10.34□□□□□ -0.75
PRAME-202ENST00000398743 FAM208BQ5VWN6 2430 aa10.34□□□□□ -0.75
PRAME-202ENST00000398743 USP9YO00507 2555 aaPredicted RBP10.34□□□□□ -0.75
PRAME-202ENST00000398743 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.33□□□□□ -0.76
PRAME-202ENST00000398743 PCP2Q8IVA1 136 aa10.33□□□□□ -0.76
PRAME-202ENST00000398743 Q96MF0 132 aa10.33□□□□□ -0.76
PRAME-202ENST00000398743 IGKV3-20P01619 116 aa10.33□□□□□ -0.76
PRAME-202ENST00000398743 PTTG1IPP53801 180 aa10.33□□□□□ -0.76
PRAME-202ENST00000398743 SEC11AP67812 179 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 UBE2V1Q13404 147 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 ZC2HC1BQ5TFG8 222 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 TOMM6Q96B49 74 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 TMEM160Q9NX00 188 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
PRAME-202ENST00000398743 KIF25-AS1Q9Y6Z4 181 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 TRAV12-2A0A075B6T6 113 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 A0A087WX48 190 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 CDKN1BP46527 198 aa10.32□□□□□ -0.76
PRAME-202ENST00000398743 CCL25O15444 150 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 DUSP14O95147 198 aaKnown RBP10.31□□□□□ -0.76
PRAME-202ENST00000398743 HSD52Q0P140 79 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 MXRA5Q9NR99 2828 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 IGKV2D-26A0A0A0MRZ7 120 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 PLNP26678 52 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 LINC00315P59091 139 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 VAMP3Q15836 100 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 ADAMTSL5Q6ZMM2 481 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 GTSCR1Q86UQ5 136 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 Q8N2B8 174 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 SCGB3A1Q96QR1 104 aa10.31□□□□□ -0.76
PRAME-202ENST00000398743 TRAV12-1A0A0B4J245 112 aa10.3□□□□□ -0.76
PRAME-202ENST00000398743 SPINK13Q1W4C9 94 aa10.3□□□□□ -0.76
PRAME-202ENST00000398743 TCTEX1D4Q5JR98 221 aa10.3□□□□□ -0.76
PRAME-202ENST00000398743 FOXI2Q6ZQN5 318 aa10.3□□□□□ -0.76
PRAME-202ENST00000398743 CSTL1Q9H114 145 aa10.3□□□□□ -0.76
PRAME-202ENST00000398743 CR1P17927 2039 aa10.3□□□□□ -0.76
PRAME-202ENST00000398743 IGHV3-16A0A0C4DH30 117 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 CBY3A6NI87 242 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 C2orf66Q6UXQ4 117 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 C9orf85Q96MD7 179 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 JPT2Q9H910 190 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 A6NDN8 102 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 H7C1H1 209 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 SLURP1P55000 103 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 DEFB136Q30KP8 78 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 ERASQ7Z444 233 aa10.29□□□□□ -0.76
PRAME-202ENST00000398743 IGHV1OR15-1A0A075B7D0 117 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 A0A087WWL8 130 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 F8VRH5 84 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 HLA-DRB4P13762 266 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 RPL32P62910 135 aaKnown RBP10.28□□□□□ -0.76
PRAME-202ENST00000398743 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 C18orf65Q6ZTR6 163 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 KRTAP1-3Q8IUG1 177 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 Q8N1Y9 231 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 SYT8Q8NBV8 401 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 HLA-DRB4X5D2U9 266 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 NAV2Q8IVL1 2488 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 MDFICQ9P1T7 246 aa10.28□□□□□ -0.76
PRAME-202ENST00000398743 PTPN13Q12923 2485 aa10.27□□□□□ -0.76
PRAME-202ENST00000398743 F5H697 171 aa10.27□□□□□ -0.77
PRAME-202ENST00000398743 LINC01619G3V211 115 aa10.27□□□□□ -0.77
PRAME-202ENST00000398743 NEXN-AS1Q8NBZ9 246 aa10.27□□□□□ -0.77
PRAME-202ENST00000398743 HIGD1BQ9P298 99 aa10.27□□□□□ -0.77
PRAME-202ENST00000398743 CHTOPQ9Y3Y2 248 aaKnown RBP10.27□□□□□ -0.77
PRAME-202ENST00000398743 PRRC2AP48634 2157 aaKnown RBP10.26□□□□□ -0.77
PRAME-202ENST00000398743 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
PRAME-202ENST00000398743 OR11H1Q8NG94 326 aa10.26□□□□□ -0.77
PRAME-202ENST00000398743 TTTY13Q9BZ97 58 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms