RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 KLHL30-AS1Q8NEE0 82 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 GNRH2O43555 120 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 SPRY2O43597 315 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 GAGE2AQ6NT46 116 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 RPL39LQ96EH5 51 aaKnown RBP8.61□□□□□ -1.03
HPS4-202ENST00000398145 MUC22E2RYF6 1773 aaPredicted RBP8.61□□□□□ -1.03
HPS4-202ENST00000398145 B5MCH6 92 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 WT1P19544 449 aaPredicted RBP8.61□□□□□ -1.03
HPS4-202ENST00000398145 NPBQ8NG41 125 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 OVOL2Q9BRP0 275 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 EDA2RQ9HAV5 297 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 KLK9Q9UKQ9 250 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 KIAA1549Q9HCM3 1950 aa8.61□□□□□ -1.03
HPS4-202ENST00000398145 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 SYNJ2BPP57105 145 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 FOXI1Q12951 378 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 C15orf53Q8NAA6 179 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 PRAC2D3DTV9 90 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 HIST1H4AP62805 103 aaKnown RBP8.6□□□□□ -1.03
HPS4-202ENST00000398145 RUSC1-AS1Q66K80 236 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 SEM1Q6ZVN7 128 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 B4DSR2 109 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 F6UB75 175 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 IGFBPL1Q8WX77 278 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
HPS4-202ENST00000398145 TRAV12-2A0A075B6T6 113 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 IGHV7-81A0A0B4J1V7 117 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 DEFB131AP59861 70 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
HPS4-202ENST00000398145 NACAE9PAV3 2078 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 E9PLD3 99 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 GHRHP01286 108 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 WISP2O76076 250 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 RHOHQ15669 191 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 MSRB2Q9Y3D2 182 aa8.59□□□□□ -1.03
HPS4-202ENST00000398145 IGHV1-69P01742 117 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 A0A1W2PNU3 283 aaPredicted RBP8.58□□□□□ -1.04
HPS4-202ENST00000398145 A4D1N5 150 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 TANC2Q9HCD6 1990 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 CACNA1AO00555 2505 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 A0A1W2PRX2 142 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 INSP01308 110 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 IGHV3-53P01767 116 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 S100A7L2Q5SY68 101 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 SPANXDQ9BXN6 97 aa8.58□□□□□ -1.04
HPS4-202ENST00000398145 MALP21145 153 aa8.57□□□□□ -1.04
HPS4-202ENST00000398145 MYCNOSP40205 109 aa8.57□□□□□ -1.04
HPS4-202ENST00000398145 ATG2AQ2TAZ0 1938 aa8.57□□□□□ -1.04
HPS4-202ENST00000398145 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
HPS4-202ENST00000398145 Q8N976 141 aa8.57□□□□□ -1.04
HPS4-202ENST00000398145 SPAG8Q99932 426 aaPredicted RBP8.57□□□□□ -1.04
HPS4-202ENST00000398145 C10orf142B7Z368 130 aa8.57□□□□□ -1.04
HPS4-202ENST00000398145 ZFP2Q6ZN57 461 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 FANCD2OSQ96PS1 177 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 TECTAO75443 2155 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 ZNF80P51504 273 aaPredicted RBP8.56□□□□□ -1.04
HPS4-202ENST00000398145 SP5Q6BEB4 398 aaPredicted RBP8.56□□□□□ -1.04
HPS4-202ENST00000398145 BAALCQ8WXS3 180 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 DNAJC30Q96LL9 226 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
HPS4-202ENST00000398145 CRYBA4P53673 196 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 LY6DQ14210 128 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 C9orf47Q6ZRZ4 202 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 IGLC6P0CF74 106 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 SS18L2Q9UHA2 77 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 TRAV26-1A0A087WT03 109 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 CENPVL3A0A0U1RRI6 287 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 IGHG4P01861 327 aa8.55□□□□□ -1.04
HPS4-202ENST00000398145 IGHV3-16A0A0C4DH30 117 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 PF4P02776 101 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 C11orf44Q8N8P7 122 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 ATP6V0E2Q8NHE4 81 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 JPT2Q9H910 190 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 PTPN13Q12923 2485 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 LINC01620Q4KN68 170 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 DSCR9P59020 149 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 RNASE13Q5GAN3 156 aaKnown RBP8.54□□□□□ -1.04
HPS4-202ENST00000398145 SUMO4Q6EEV6 95 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 PIP4P1Q86T03 277 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 Q8N9W7 124 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 PTH2Q96A98 100 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 C11orf68Q9H3H3 251 aaKnown RBP8.54□□□□□ -1.04
HPS4-202ENST00000398145 IGHV3-38A0A0C4DH36 116 aa8.54□□□□□ -1.04
HPS4-202ENST00000398145 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
HPS4-202ENST00000398145 VWC2LB2RUY7 222 aa8.53□□□□□ -1.04
HPS4-202ENST00000398145 K7ENP7 123 aa8.53□□□□□ -1.04
HPS4-202ENST00000398145 IGKV2D-26A0A0A0MRZ7 120 aa8.53□□□□□ -1.04
HPS4-202ENST00000398145 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
HPS4-202ENST00000398145 C16orf54Q6UWD8 224 aa8.53□□□□□ -1.04
HPS4-202ENST00000398145 MSMBP08118 114 aa8.53□□□□□ -1.04
HPS4-202ENST00000398145 CRIP1P50238 77 aa8.53□□□□□ -1.04
HPS4-202ENST00000398145 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms