RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 GAGE12FP0CL80 117 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE12GP0CL81 117 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE12IP0CL82 117 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 SCGB1C2P0DMR2 95 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE2BQ13066 116 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE4Q13068 117 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE2EQ4V326 116 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 VMO1Q7Z5L0 202 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 ATP6V0E2Q8NHE4 81 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 GAGE2DQ9UEU5 116 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 ODF3BA8MYP8 253 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 M0R381 172 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 SPRY2O43597 315 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 CRIP2P52943 208 aaPredicted RBP7.01□□□□□ -1.29
CAPN3-206ENST00000397163 ORMDL2Q53FV1 153 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 TTC32Q5I0X7 151 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 CLEC19AQ6UXS0 136 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 TIMD4Q96H15 378 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 ZFAND3Q9H8U3 227 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 ZNF815PA8K554 130 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 A8MWV9 139 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 SNCGO76070 127 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 PRADC1Q9BSG0 188 aa7.01□□□□□ -1.29
CAPN3-206ENST00000397163 M0R1W7 72 aa7□□□□□ -1.29
CAPN3-206ENST00000397163 TRPT1Q86TN4 253 aaKnown RBP7□□□□□ -1.29
CAPN3-206ENST00000397163 MED13LQ71F56 2210 aa7□□□□□ -1.29
CAPN3-206ENST00000397163 SUMO2P61956 95 aaKnown RBP7□□□□□ -1.29
CAPN3-206ENST00000397163 PRR30Q53SZ7 412 aaPredicted RBP7□□□□□ -1.29
CAPN3-206ENST00000397163 RAX2Q96IS3 184 aa7□□□□□ -1.29
CAPN3-206ENST00000397163 METTL26Q96S19 204 aa7□□□□□ -1.29
CAPN3-206ENST00000397163 C9JAW5 83 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 LINC01619G3V211 115 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 S100A4P26447 101 aaKnown RBP6.99□□□□□ -1.29
CAPN3-206ENST00000397163 CITED1Q99966 193 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 MGPP08493 103 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 SLC25A16P16260 332 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 Q8N6K4 173 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 NEXN-AS1Q8NBZ9 246 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 TOMM6Q96B49 74 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 RPL39LQ96EH5 51 aaKnown RBP6.99□□□□□ -1.29
CAPN3-206ENST00000397163 C16orf92Q96LL3 132 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 IGHV4-4A0A075B6R2 117 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 CLPSL1A2RUU4 121 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 ARL3P36405 182 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 C2orf66Q6UXQ4 117 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 C14orf178Q8N769 122 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-206ENST00000397163 Q8N9W7 124 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 Q8NA96 180 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 FAM110DQ8TAY7 271 aaPredicted RBP6.99□□□□□ -1.29
CAPN3-206ENST00000397163 PPDPFQ9H3Y8 114 aa6.99□□□□□ -1.29
CAPN3-206ENST00000397163 PIEZO2Q9H5I5 2752 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 RHODO00212 210 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 BAALCQ8WXS3 180 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 ATP6V0E1O15342 81 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 IFITM1P13164 125 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 PRR9Q5T870 116 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 C9orf47Q6ZRZ4 202 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 RASL10AQ92737 203 aa6.98□□□□□ -1.29
CAPN3-206ENST00000397163 G3V318 75 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 IGF1P05019 195 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 MEIG1Q5JSS6 88 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 MRPL53Q96EL3 112 aaKnown RBP6.97□□□□□ -1.29
CAPN3-206ENST00000397163 CCDC140Q96MF4 163 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 PHLDA3Q9Y5J5 127 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 OOSP1A8MZH6 123 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 GRNP28799 593 aaKnown RBP6.97□□□□□ -1.29
CAPN3-206ENST00000397163 EBI3Q14213 229 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 NTN5Q8WTR8 489 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-206ENST00000397163 DPH3P1Q9H4G8 78 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 BEX4Q9NWD9 120 aaPredicted RBP6.97□□□□□ -1.29
CAPN3-206ENST00000397163 UBE2D3P61077 147 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 UBE2D2P62837 147 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 Q6ZS46 218 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 EEF1AKMT3Q96AZ1 226 aa6.97□□□□□ -1.29
CAPN3-206ENST00000397163 SLC25A20O43772 301 aa6.96□□□□□ -1.29
CAPN3-206ENST00000397163 MINOS1Q5TGZ0 78 aa6.96□□□□□ -1.29
CAPN3-206ENST00000397163 TNFRSF18Q9Y5U5 241 aa6.96□□□□□ -1.29
CAPN3-206ENST00000397163 MINOS1-NBL1R4GNA1 71 aa6.96□□□□□ -1.29
CAPN3-206ENST00000397163 SPTA1P02549 2419 aa6.96□□□□□ -1.3
CAPN3-206ENST00000397163 ANKHD1Q8IWZ3 2542 aaKnown RBP6.96□□□□□ -1.3
CAPN3-206ENST00000397163 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.3
CAPN3-206ENST00000397163 SRD5A1P18405 259 aa6.96□□□□□ -1.3
CAPN3-206ENST00000397163 ASIPP42127 132 aa6.96□□□□□ -1.3
CAPN3-206ENST00000397163 NDUFA11Q86Y39 141 aa6.96□□□□□ -1.3
CAPN3-206ENST00000397163 CHCHD5Q9BSY4 110 aa6.96□□□□□ -1.3
CAPN3-206ENST00000397163 IGHV4-39P01824 125 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 LYRM7Q5U5X0 104 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 PRORYQ9H606 182 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 TRAV21A0A0B4J279 112 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 M0QXV9 152 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 UBE2D1P51668 147 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 PKD1L2Q7Z442 2459 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 ELANEP08246 267 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 ATP5J2P56134 94 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 HERVK_113P61574 105 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 C15orf53Q8NAA6 179 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 YAE1D1Q9NRH1 226 aa6.95□□□□□ -1.3
CAPN3-206ENST00000397163 DUSP14O95147 198 aaKnown RBP6.94□□□□□ -1.3
CAPN3-206ENST00000397163 CD7P09564 240 aa6.94□□□□□ -1.3
CAPN3-206ENST00000397163 DEFB1P60022 68 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms