RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 C2orf66Q6UXQ4 117 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 SS18L2Q9UHA2 77 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 IGHV3-64A0A075B6Q5 118 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 G3V318 75 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 LY6LH3BQJ8 138 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 TSPAN13O95857 204 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 C16orf92Q96LL3 132 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 CD3EP07766 207 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 ZNF672Q499Z4 452 aaPredicted RBP7.53□□□□□ -1.2
TRIM39-203ENST00000396547 TMEM170BQ5T4T1 132 aa7.53□□□□□ -1.2
TRIM39-203ENST00000396547 IGHV7-4-1A0A0J9YVY3 117 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
TRIM39-203ENST00000396547 CFAP126Q5VTH2 177 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 BEX4Q9NWD9 120 aaPredicted RBP7.52□□□□□ -1.21
TRIM39-203ENST00000396547 PHLDA3Q9Y5J5 127 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 FAM90A27PA6NNH2 459 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 BUB3O43684 328 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 PRR9Q5T870 116 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 Q6ZUT4 128 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 PSMG3-AS1Q96PY0 264 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 RNF5Q99942 180 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
TRIM39-203ENST00000396547 F5H697 171 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 DUSP14O95147 198 aaKnown RBP7.51□□□□□ -1.21
TRIM39-203ENST00000396547 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 CARD19Q96LW7 228 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 ANAPC13Q9BS18 74 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 TCL1BO95988 128 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 GRNP28799 593 aaKnown RBP7.51□□□□□ -1.21
TRIM39-203ENST00000396547 GNRH2O43555 120 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 RNASE4P34096 147 aaKnown RBP7.51□□□□□ -1.21
TRIM39-203ENST00000396547 Q6ZS46 218 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 RASL10AQ92737 203 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 CITED1Q99966 193 aa7.51□□□□□ -1.21
TRIM39-203ENST00000396547 SORL1Q92673 2214 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 F6UB75 175 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 TCTEX1D4Q5JR98 221 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 GNLYP22749 145 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 RPL39P62891 51 aaKnown RBP7.5□□□□□ -1.21
TRIM39-203ENST00000396547 Q1RN00 199 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 COX8CQ7Z4L0 72 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 NEXN-AS1Q8NBZ9 246 aa7.5□□□□□ -1.21
TRIM39-203ENST00000396547 TRBV20-1A0A075B6N2 111 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 IGHV7-81A0A0B4J1V7 117 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 C11orf86A6NJI1 115 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 A8MWV9 139 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 B5MCH6 92 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 SRD5A1P18405 259 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 VMO1Q7Z5L0 202 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 NPBQ8NG41 125 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 CREBBPQ92793 2442 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 TRAV8-2A0A0B4J237 113 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 C9JAW5 83 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 FBXL19-AS1Q494R0 122 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 TRPT1Q86TN4 253 aaKnown RBP7.49□□□□□ -1.21
TRIM39-203ENST00000396547 ANKRD29Q8N6D5 301 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 PPDPFLQ8WWR9 84 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 METTL26Q96S19 204 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 JPT2Q9H910 190 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 ATP6V0E1O15342 81 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 ID1P41134 155 aa7.49□□□□□ -1.21
TRIM39-203ENST00000396547 A0A087WWL8 130 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 IGHV4-39P01824 125 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 TOMM6Q96B49 74 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 TP53TG1Q9Y2A0 90 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 IGHV3OR16-10A0A075B7F0 116 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 TRBV7-9A0A0J9YWB2 115 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 CRIP2P52943 208 aaPredicted RBP7.48□□□□□ -1.21
TRIM39-203ENST00000396547 FAM74A4Q5TZK3 123 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 NDUFA11Q86Y39 141 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 SLC50A1Q9BRV3 221 aa7.48□□□□□ -1.21
TRIM39-203ENST00000396547 UTP20O75691 2785 aaKnown RBP7.47□□□□□ -1.21
TRIM39-203ENST00000396547 TRAV2A0A0B4J234 112 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 TEN1Q86WV5 123 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 TEX29Q8N6K0 151 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 OR11H6Q8NGC7 330 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 OPRPNQ99935 248 aaPredicted RBP7.47□□□□□ -1.21
TRIM39-203ENST00000396547 ZNF256Q9Y2P7 627 aaPredicted RBP7.47□□□□□ -1.21
TRIM39-203ENST00000396547 TRAV12-1A0A0B4J245 112 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 C20orf173Q96LM9 149 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.47□□□□□ -1.219e-7■■■■■ 39.9
TRIM39-203ENST00000396547 CLPSL1A2RUU4 121 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 ZNF688P0C7X2 276 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 CFC1BP0CG36 223 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 CFC1P0CG37 223 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 ASIPP42127 132 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 ZFAND6Q6FIF0 208 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 TMEM219Q86XT9 240 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 TIMD4Q96H15 378 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 DPH3P1Q9H4G8 78 aa7.47□□□□□ -1.21
TRIM39-203ENST00000396547 HERVK_113P61574 105 aa7.46□□□□□ -1.22
TRIM39-203ENST00000396547 SRSF2Q01130 221 aaKnown RBP7.46□□□□□ -1.22
TRIM39-203ENST00000396547 ITLN2Q8WWU7 325 aaPredicted RBP7.46□□□□□ -1.22
TRIM39-203ENST00000396547 CELSR1Q9NYQ6 3014 aa7.46□□□□□ -1.22
TRIM39-203ENST00000396547 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms