RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 LGALS9BQ3B8N2 356 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 CD300EQ496F6 205 aaPredicted RBP7.1□□□□□ -1.27
NDE1-201ENST00000396354 LGALS9CQ6DKI2 356 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 BOD1L2Q8IYS8 172 aa7.1□□□□□ -1.27
NDE1-201ENST00000396354 C9orf118A6NHY6 69 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 H7C2G1 150 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 PLA2G2AP14555 144 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 ATP5G2Q06055 141 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 HSD52Q0P140 79 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 EBI3Q14213 229 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 SCGB1D4Q6XE38 83 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 C20orf173Q96LM9 149 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 TRAV12-2A0A075B6T6 113 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 IGLC6P0CF74 106 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 ZNF493Q6ZR52 646 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 SH2D6Q7Z4S9 175 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 GTSF1LQ9H1H1 148 aa7.09□□□□□ -1.27
NDE1-201ENST00000396354 IGHV4-61A0A0C4DH41 118 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 A0A1B0GW15 77 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 DPM2O94777 84 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 SEC11AP67812 179 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 PAX8Q06710 450 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 KLHL30-AS1Q8NEE0 82 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 SCGB3A1Q96QR1 104 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 HECTD1Q9ULT8 2610 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 TRAV8-2A0A0B4J237 113 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 TEX48A0A1B0GUV7 120 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 CLPSL1A2RUU4 121 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 APOMO95445 188 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 ADAMTSL5Q6ZMM2 481 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 C1orf122Q6ZSJ8 110 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 ZNF575Q86XF7 245 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 EEF1AKMT3Q96AZ1 226 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 ZNF256Q9Y2P7 627 aaPredicted RBP7.08□□□□□ -1.28
NDE1-201ENST00000396354 HIVEP2P31629 2446 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 APCP25054 2843 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 LOC107984156A0A0G2JMH3 177 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 CENPVL3A0A0U1RRI6 287 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 IGHV4-38-2P0DP08 117 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 ARL17AQ8IVW1 177 aa7.08□□□□□ -1.28
NDE1-201ENST00000396354 IGHV3-73A0A0B4J1V6 119 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 A0A1W2PPM0 123 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 J3QKU1 62 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 NDUFS8O00217 210 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 SMAGPQ0VAQ4 97 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 LAGE3Q14657 143 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 ANXA2RQ3ZCQ2 193 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 ETDBQ3ZM63 59 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 C10orf99Q6UWK7 81 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 TRAV41A0A0B4J266 112 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 H3BUX3 64 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 NPFFO15130 113 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 RPS20P60866 119 aaKnown RBP7.07□□□□□ -1.28
NDE1-201ENST00000396354 WFDC2Q14508 124 aa7.07□□□□□ -1.28
NDE1-201ENST00000396354 TRAV12-3A0A0B4J271 114 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 PRM2P04554 102 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 UBE2E1P51965 193 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 SRSF9Q13242 221 aaKnown RBP eCLIP7.06□□□□□ -1.28
NDE1-201ENST00000396354 PIFOQ8TCI5 191 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 SRSF8Q9BRL6 282 aaKnown RBP7.06□□□□□ -1.28
NDE1-201ENST00000396354 NXT2Q9NPJ8 142 aaKnown RBP7.06□□□□□ -1.28
NDE1-201ENST00000396354 HHLA3Q9XRX5 114 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 NBEAL2Q6ZNJ1 2754 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.06□□□□□ -1.28
NDE1-201ENST00000396354 K7EP34 96 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 ZNF688P0C7X2 276 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 RPL39P62891 51 aaKnown RBP7.06□□□□□ -1.28
NDE1-201ENST00000396354 MINOS1Q5TGZ0 78 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 ZNF418Q8TF45 676 aaPredicted RBP7.06□□□□□ -1.28
NDE1-201ENST00000396354 MINOS1-NBL1R4GNA1 71 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 H3BRM9 83 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 OR10J6PQ8NGY7 276 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 DPF1Q92782 380 aa7.06□□□□□ -1.28
NDE1-201ENST00000396354 HIST2H2BCQ6DN03 193 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 FAM110DQ8TAY7 271 aaPredicted RBP7.05□□□□□ -1.28
NDE1-201ENST00000396354 OPRPNQ99935 248 aaPredicted RBP7.05□□□□□ -1.28
NDE1-201ENST00000396354 IGHV4-30-2A0A087WSY4 118 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 OR11H12B2RN74 326 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 OR11H1Q8NG94 326 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 OR9G4Q8NGQ1 327 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 OR11H2Q8NH07 326 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 ZNF479Q96JC4 524 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 U3KQK5 164 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 IGHV7-4-1A0A0J9YVY3 117 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 OR4X2Q8NGF9 303 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 KLK9Q9UKQ9 250 aa7.05□□□□□ -1.28
NDE1-201ENST00000396354 CD7P09564 240 aa7.04□□□□□ -1.28
NDE1-201ENST00000396354 HLA-DRB4P13762 266 aa7.04□□□□□ -1.28
NDE1-201ENST00000396354 TMEM170BQ5T4T1 132 aa7.04□□□□□ -1.28
NDE1-201ENST00000396354 Q8N8P6 123 aa7.04□□□□□ -1.28
NDE1-201ENST00000396354 HLA-DRB4X5D2U9 266 aa7.04□□□□□ -1.28
NDE1-201ENST00000396354 INSL3P51460 131 aa7.04□□□□□ -1.28
NDE1-201ENST00000396354 RNASE13Q5GAN3 156 aaKnown RBP7.04□□□□□ -1.28
NDE1-201ENST00000396354 ZNF815PA8K554 130 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 DUSP14O95147 198 aaKnown RBP7.03□□□□□ -1.28
NDE1-201ENST00000396354 KHDC1LQ5JSQ8 128 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 C2orf66Q6UXQ4 117 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 C5orf56Q8N8D9 126 aa7.03□□□□□ -1.28
NDE1-201ENST00000396354 SLC50A1Q9BRV3 221 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms