RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 ODF3Q96PU9 254 aa10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 DPH3P1Q9H4G8 78 aa10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 HOXD3P31249 432 aaPredicted RBP10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 GAGE1Q13065 139 aa10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 ODF1Q14990 250 aa10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 MPV17L2Q567V2 206 aa10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 PSMG4Q5JS54 123 aa10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 ZMAT4Q9H898 229 aa10.36□□□□□ -0.75
SNCAIP-204ENST00000395466 A0A0J9YX75 114 aa10.35□□□□□ -0.75
SNCAIP-204ENST00000395466 LAGE3Q14657 143 aa10.35□□□□□ -0.75
SNCAIP-204ENST00000395466 ADAMTSL5Q6ZMM2 481 aa10.35□□□□□ -0.75
SNCAIP-204ENST00000395466 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
SNCAIP-204ENST00000395466 POM121L12Q8N7R1 296 aa10.35□□□□□ -0.75
SNCAIP-204ENST00000395466 WFDC12Q8WWY7 111 aa10.35□□□□□ -0.75
SNCAIP-204ENST00000395466 SMIM2Q9BVW6 85 aa10.35□□□□□ -0.75
SNCAIP-204ENST00000395466 SMIM17P0DL12 118 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 BVES-AS1Q5T3Y7 98 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 DUX5Q96PT3 197 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 KIF25-AS1Q9Y6Z4 181 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 APCP25054 2843 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 C7orf71A4D174 169 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 NUDT3O95989 172 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 LINC00315P59091 139 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 C18orf65Q6ZTR6 163 aa10.34□□□□□ -0.75
SNCAIP-204ENST00000395466 ZNF469Q96JG9 3925 aaPredicted RBP10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 RPL39LQ96EH5 51 aaKnown RBP10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 AP1S3Q96PC3 154 aa10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 C20orf78Q9BR46 151 aa10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
SNCAIP-204ENST00000395466 ATP5LO75964 103 aa10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 NPSP0C0P6 89 aa10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 SUMO2P61956 95 aaKnown RBP10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 Q6ZVH6 145 aa10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 NBPF19A0A087WUL8 3843 aa10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 FOXC2Q99958 501 aa10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 HHLA3Q9XRX5 114 aa10.32□□□□□ -0.76
SNCAIP-204ENST00000395466 ITPR3Q14573 2671 aa10.31□□□□□ -0.76
SNCAIP-204ENST00000395466 PRSS1P07477 247 aa10.31□□□□□ -0.76
SNCAIP-204ENST00000395466 MGPP08493 103 aa10.31□□□□□ -0.76
SNCAIP-204ENST00000395466 SLURP1P55000 103 aa10.31□□□□□ -0.76
SNCAIP-204ENST00000395466 C12orf54Q6X4T0 127 aa10.31□□□□□ -0.76
SNCAIP-204ENST00000395466 ORAOV1Q8WV07 137 aa10.31□□□□□ -0.76
SNCAIP-204ENST00000395466 MYO9AB2RTY4 2548 aa10.31□□□□□ -0.76
SNCAIP-204ENST00000395466 CD7P09564 240 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 DEFB136Q30KP8 78 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 TCTEX1D4Q5JR98 221 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 C9orf85Q96MD7 179 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 COX11Q9Y6N1 276 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 IGHV3-16A0A0C4DH30 117 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 IGKV3-20P01619 116 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 TCTAP57738 103 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 AMTNQ6UX39 209 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 JPT2Q9H910 190 aa10.3□□□□□ -0.76
SNCAIP-204ENST00000395466 TRAV12-2A0A075B6T6 113 aa10.29□□□□□ -0.76
SNCAIP-204ENST00000395466 K7EMI3 77 aa10.29□□□□□ -0.76
SNCAIP-204ENST00000395466 FOXI2Q6ZQN5 318 aa10.29□□□□□ -0.76
SNCAIP-204ENST00000395466 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
SNCAIP-204ENST00000395466 AKAP9Q99996 3911 aa10.29□□□□□ -0.76
SNCAIP-204ENST00000395466 SONP18583 2426 aaKnown RBP10.28□□□□□ -0.76
SNCAIP-204ENST00000395466 IGKCP01834 107 aa10.28□□□□□ -0.76
SNCAIP-204ENST00000395466 CDKN1BP46527 198 aa10.28□□□□□ -0.76
SNCAIP-204ENST00000395466 ORMDL2Q53FV1 153 aa10.28□□□□□ -0.76
SNCAIP-204ENST00000395466 WFDC11Q8NEX6 87 aa10.28□□□□□ -0.76
SNCAIP-204ENST00000395466 IGKV2D-26A0A0A0MRZ7 120 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 TAX1BP3O14907 124 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 DPM2O94777 84 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 DUSP14O95147 198 aaKnown RBP10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 SPINK13Q1W4C9 94 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 TMEM86BQ8N661 226 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 C4orf3Q8WVX3 66 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 TOMM6Q96B49 74 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 MRPL35Q9NZE8 188 aaKnown RBP10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 MDFICQ9P1T7 246 aa10.27□□□□□ -0.76
SNCAIP-204ENST00000395466 A0A087WX48 190 aa10.27□□□□□ -0.77
SNCAIP-204ENST00000395466 LINC01619G3V211 115 aa10.27□□□□□ -0.77
SNCAIP-204ENST00000395466 SIVA1O15304 175 aa10.27□□□□□ -0.77
SNCAIP-204ENST00000395466 PPP1R17O96001 155 aa10.27□□□□□ -0.77
SNCAIP-204ENST00000395466 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
SNCAIP-204ENST00000395466 IGHV1OR15-1A0A075B7D0 117 aa10.26□□□□□ -0.77
SNCAIP-204ENST00000395466 A8MTW9 85 aa10.26□□□□□ -0.77
SNCAIP-204ENST00000395466 NMUP48645 174 aa10.26□□□□□ -0.77
SNCAIP-204ENST00000395466 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
SNCAIP-204ENST00000395466 Q8N1Y9 231 aa10.26□□□□□ -0.77
SNCAIP-204ENST00000395466 OR9G4Q8NGQ1 327 aa10.26□□□□□ -0.77
SNCAIP-204ENST00000395466 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
SNCAIP-204ENST00000395466 TRAV12-1A0A0B4J245 112 aa10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 TMEM97Q5BJF2 176 aa10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 HIST2H2BCQ6DN03 193 aa10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 OR11H1Q8NG94 326 aa10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 A0A087WWL8 130 aa10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 POLR2KP53803 58 aaKnown RBP10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 Q6ZSV7 163 aa10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 DUX3Q96PT4 197 aa10.25□□□□□ -0.77
SNCAIP-204ENST00000395466 CCDC168Q8NDH2 2452 aa10.24□□□□□ -0.77
SNCAIP-204ENST00000395466 TRAV2A0A0B4J234 112 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms