RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 GREB1Q4ZG55 1949 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 IGKV1D-17A0A075B6S4 117 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 IGHV1OR15-1A0A075B7D0 117 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 IGHV1-45A0A0A0MS14 117 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 ZFP92A6NM28 416 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 ANKRD36A6QL64 1941 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 CCKP06307 115 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 PATE4P0C8F1 98 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 SMIM13P0DJ93 91 aa3.09□□□□□ -1.92
HERC4-204ENST00000395198 RBM3P98179 157 aaKnown RBP3.09□□□□□ -1.92
HERC4-204ENST00000395198 MYO16Q9Y6X6 1858 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 UBE2L5PA0A1B0GUS4 154 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 PRH1P02810 166 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 ZNF32P17041 273 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 UBE2G1P62253 170 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 UBE2L3P68036 154 aaKnown RBP3.08□□□□□ -1.92
HERC4-204ENST00000395198 C17orf58Q2M2W7 97 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 ZFYVE26Q68DK2 2539 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 TRAV2A0A0B4J234 112 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 IGHV4-30-4P0DP06 118 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 RPL7L1Q6DKI1 246 aaKnown RBP3.08□□□□□ -1.92
HERC4-204ENST00000395198 SOSTDC1Q6X4U4 206 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 ZFP2Q6ZN57 461 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 FLVCR1-AS1Q8TAF5 88 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 NYNRINQ9P2P1 1898 aaKnown RBP3.08□□□□□ -1.92
HERC4-204ENST00000395198 AGRNO00468 2067 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 IGLV3-12A0A075B6K2 115 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 IGHV3-43DP0DP04 118 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 COX8AP10176 69 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 NANOS3P60323 173 aaKnown RBP3.08□□□□□ -1.92
HERC4-204ENST00000395198 KLF9Q13886 244 aaPredicted RBP3.08□□□□□ -1.92
HERC4-204ENST00000395198 C2orf83Q53S99 150 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 LINC01600Q96MT4 127 aa3.08□□□□□ -1.92
HERC4-204ENST00000395198 CEP295Q9C0D2 2601 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 IBA57-AS1B1ANH7 110 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 SRP19P09132 144 aaKnown RBP3.07□□□□□ -1.92
HERC4-204ENST00000395198 MRPS36P82909 103 aaKnown RBP3.07□□□□□ -1.92
HERC4-204ENST00000395198 CELA1Q9UNI1 258 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 F2Z2F3 143 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 FXYD1O00168 92 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 NPCDR1Q9BY65 106 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 NXT2Q9NPJ8 142 aaKnown RBP3.07□□□□□ -1.92
HERC4-204ENST00000395198 CMC2Q9NRP2 79 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 HEATR1Q9H583 2144 aaKnown RBP3.07□□□□□ -1.92
HERC4-204ENST00000395198 IGHV4-61A0A0C4DH41 118 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 ATOX1O00244 68 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 IGHV4-59P01825 116 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 PRM2P04554 102 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 C5orf38Q86SI9 138 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 FAM103A1Q9BTL3 118 aaKnown RBP3.07□□□□□ -1.92
HERC4-204ENST00000395198 NACAE9PAV3 2078 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 SPEGQ15772 3267 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 PIEZO2Q9H5I5 2752 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 CCL8P80075 99 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 Q6P435 159 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 SLC25A29Q8N8R3 303 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 ZNF524Q96C55 264 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 TLN1Q9Y490 2541 aaKnown RBP3.07□□□□□ -1.92
HERC4-204ENST00000395198 PLCE1Q9P212 2302 aa3.07□□□□□ -1.92
HERC4-204ENST00000395198 LCTP09848 1927 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 DOCK10Q96BY6 2186 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 SHANK1Q9Y566 2161 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 DOPEY1Q5JWR5 2465 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 S100A7L2Q5SY68 101 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 TTTY13Q9BZ97 58 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 EYSQ5T1H1 3165 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 PLXNA2O75051 1894 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 A0A1W2PS18 150 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 ZNF736B4DX44 427 aaPredicted RBP3.06□□□□□ -1.92
HERC4-204ENST00000395198 NTN3O00634 580 aaPredicted RBP3.06□□□□□ -1.92
HERC4-204ENST00000395198 IGKV1-39P01597 117 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 IGKV1D-39P04432 117 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 FUSP35637 526 aaKnown RBP eCLIP3.06□□□□□ -1.922e-6■■■■□ 19.5
HERC4-204ENST00000395198 FAM229BQ4G0N7 80 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 APCDD1LQ8NCL9 501 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 LINC01560Q8TB33 94 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 PROK2Q9HC23 129 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 JMJD1CQ15652 2540 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 PIGBOS1A0A0B4J2F0 54 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 SYNJ2BPP57105 145 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 CCL20P78556 96 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 HIVEP3Q5T1R4 2406 aa3.06□□□□□ -1.92
HERC4-204ENST00000395198 TRBV6-7A0A0A0MS04 114 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 A8MU10 97 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 E7EQL1 145 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 DEFA4P12838 97 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 COX7A1P24310 79 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 FGF12P61328 243 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 Q6ZRP5 223 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 FAM104AQ969W3 186 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 NAV2Q8IVL1 2488 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 HIVEP2P31629 2446 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 ANKHD1Q8IWZ3 2542 aaKnown RBP3.05□□□□□ -1.92
HERC4-204ENST00000395198 CEBPZOSA8MTT3 80 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 B4DSR2 109 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 HERVK_113P61574 105 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 BLCAPP62952 87 aa3.05□□□□□ -1.92
HERC4-204ENST00000395198 PRAC1Q96KF2 57 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms