RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 J3KRW8 73 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 VPREB3Q9UKI3 123 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 TSSC4Q9Y5U2 329 aaPredicted RBP10.53□□□□□ -0.72
SNCA-204ENST00000394989 AMTNQ6UX39 209 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 Q6YL49 198 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 SH2D6Q7Z4S9 175 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 LINC00477Q96M19 166 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
SNCA-204ENST00000394989 FABP2P12104 132 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 FCER1GP30273 86 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 DKK2Q9UBU2 259 aa10.53□□□□□ -0.72
SNCA-204ENST00000394989 CREBBPQ92793 2442 aa10.52□□□□□ -0.72
SNCA-204ENST00000394989 A0A1W2PPM0 123 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.52□□□□□ -0.73
SNCA-204ENST00000394989 H3BRM9 83 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 OVOL1O14753 267 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 EVI2AP22794 236 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 KRTAP1-3Q8IUG1 177 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 OR10J6PQ8NGY7 276 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 K7EMT4 169 aa10.52□□□□□ -0.73
SNCA-204ENST00000394989 PRRC2AP48634 2157 aaKnown RBP10.52□□□□□ -0.73
SNCA-204ENST00000394989 SFTA2Q6UW10 78 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 BEX4Q9NWD9 120 aaPredicted RBP10.51□□□□□ -0.73
SNCA-204ENST00000394989 NHP2Q9NX24 153 aaKnown RBP10.51□□□□□ -0.73
SNCA-204ENST00000394989 DOPEY2Q9Y3R5 2298 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 FGF6P10767 208 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 GATA1P15976 413 aaPredicted RBP10.51□□□□□ -0.73
SNCA-204ENST00000394989 FXYD2P54710 66 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 ZNF702PQ9H963 129 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 HOXA3O43365 443 aaPredicted RBP10.51□□□□□ -0.73
SNCA-204ENST00000394989 WFDC2Q14508 124 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 CHD6Q8TD26 2715 aa10.51□□□□□ -0.73
SNCA-204ENST00000394989 ITPR3Q14573 2671 aa10.5□□□□□ -0.73
SNCA-204ENST00000394989 AGRNO00468 2067 aa10.5□□□□□ -0.73
SNCA-204ENST00000394989 ETDBQ3ZM63 59 aa10.5□□□□□ -0.73
SNCA-204ENST00000394989 ADAMTSL5Q6ZMM2 481 aa10.5□□□□□ -0.73
SNCA-204ENST00000394989 TMEM89A2RUT3 159 aa10.5□□□□□ -0.73
SNCA-204ENST00000394989 LRRC75A-AS1Q8N1F1 130 aa10.5□□□□□ -0.73
SNCA-204ENST00000394989 Q96MF0 132 aa10.5□□□□□ -0.73
SNCA-204ENST00000394989 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 H3BVH4 76 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 APRG1Q8IVJ8 170 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 TNFRSF6BO95407 300 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 NEGR1Q7Z3B1 354 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 MYOZ3Q8TDC0 251 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 SIGMAR1Q99720 223 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 SPRY2O43597 315 aa10.49□□□□□ -0.73
SNCA-204ENST00000394989 H3BMG7 143 aa10.48□□□□□ -0.73
SNCA-204ENST00000394989 HSD52Q0P140 79 aa10.48□□□□□ -0.73
SNCA-204ENST00000394989 TRAV21A0A0B4J279 112 aa10.48□□□□□ -0.73
SNCA-204ENST00000394989 LINC01546A6NGU7 62 aa10.48□□□□□ -0.73
SNCA-204ENST00000394989 UFC1Q9Y3C8 167 aa10.48□□□□□ -0.73
SNCA-204ENST00000394989 IGKV2D-26A0A0A0MRZ7 120 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 TRAV26-2A0A0B4J265 109 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 SMIM13P0DJ93 91 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 RNASE4P34096 147 aaKnown RBP10.47□□□□□ -0.73
SNCA-204ENST00000394989 INSL3P51460 131 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 GTSCR1Q86UQ5 136 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 HBDP02042 147 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 PRSS1P07477 247 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 ANXA2RQ3ZCQ2 193 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 SPANXN1Q5VSR9 72 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 DUX5Q96PT3 197 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 MAP1LC3AQ9H492 121 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 IGHV4OR15-8A0A075B7B6 117 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 A0A087WW49 117 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 BOD1L2Q8IYS8 172 aa10.47□□□□□ -0.73
SNCA-204ENST00000394989 TLN2Q9Y4G6 2542 aa10.46□□□□□ -0.73
SNCA-204ENST00000394989 NF1P21359 2839 aa10.46□□□□□ -0.74
SNCA-204ENST00000394989 IGLV2-18A0A075B6J9 118 aa10.46□□□□□ -0.74
SNCA-204ENST00000394989 LGALS1P09382 135 aaKnown RBP10.46□□□□□ -0.74
SNCA-204ENST00000394989 SYNJ2BPP57105 145 aa10.46□□□□□ -0.74
SNCA-204ENST00000394989 NRACQ8N912 160 aa10.46□□□□□ -0.74
SNCA-204ENST00000394989 PDZD2O15018 2839 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 GAGE12HA6NDE8 117 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 IFI27L1Q96BM0 104 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 GNRH2O43555 120 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 ELANEP08246 267 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 KLLNB2CW77 178 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 RNF152Q8N8N0 203 aa10.45□□□□□ -0.74
SNCA-204ENST00000394989 MYO9AB2RTY4 2548 aa10.44□□□□□ -0.74
SNCA-204ENST00000394989 UBE2E2Q96LR5 201 aa10.44□□□□□ -0.74
SNCA-204ENST00000394989 RNASE3P12724 160 aaKnown RBP10.44□□□□□ -0.74
SNCA-204ENST00000394989 C18orf65Q6ZTR6 163 aa10.44□□□□□ -0.74
SNCA-204ENST00000394989 OR5A1Q8NGJ0 315 aa10.44□□□□□ -0.74
SNCA-204ENST00000394989 M0R381 172 aa10.43□□□□□ -0.74
SNCA-204ENST00000394989 HOXD3P31249 432 aaPredicted RBP10.43□□□□□ -0.74
SNCA-204ENST00000394989 ID1P41134 155 aa10.43□□□□□ -0.74
SNCA-204ENST00000394989 HIST2H2BCQ6DN03 193 aa10.43□□□□□ -0.74
SNCA-204ENST00000394989 NXT2Q9NPJ8 142 aaKnown RBP10.43□□□□□ -0.74
SNCA-204ENST00000394989 TMEM160Q9NX00 188 aa10.43□□□□□ -0.74
SNCA-204ENST00000394989 TRAV26-1A0A087WT03 109 aa10.43□□□□□ -0.74
SNCA-204ENST00000394989 ZNF688P0C7X2 276 aa10.43□□□□□ -0.74
SNCA-204ENST00000394989 ASIPP42127 132 aa10.43□□□□□ -0.74
SNCA-204ENST00000394989 FLNAP21333 2647 aaKnown RBP10.43□□□□□ -0.74
SNCA-204ENST00000394989 LEPP41159 167 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms