RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 PPP1R1CQ8WVI7 109 aa13.88□□□□□ -0.19
TRAF4-203ENST00000394925 PTH2Q96A98 100 aa13.88□□□□□ -0.19
TRAF4-203ENST00000394925 SH3BGRL3Q9H299 93 aa13.88□□□□□ -0.19
TRAF4-203ENST00000394925 GCGP01275 180 aa13.87□□□□□ -0.19
TRAF4-203ENST00000394925 ACOT6Q3I5F7 207 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-203ENST00000394925 RNASE3P12724 160 aaKnown RBP13.86□□□□□ -0.19
TRAF4-203ENST00000394925 KRTAP10-4P60372 401 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-203ENST00000394925 RAB2AP61019 212 aa13.86□□□□□ -0.19
TRAF4-203ENST00000394925 CHAC1Q9BUX1 264 aa13.86□□□□□ -0.19
TRAF4-203ENST00000394925 COX11Q9Y6N1 276 aa13.86□□□□□ -0.19
TRAF4-203ENST00000394925 LINC00694P0DN24 101 aa13.85□□□□□ -0.19
TRAF4-203ENST00000394925 RPL12P30050 165 aaKnown RBP13.85□□□□□ -0.19
TRAF4-203ENST00000394925 H2BFSP57053 126 aa13.85□□□□□ -0.19
TRAF4-203ENST00000394925 ASAH1Q13510 395 aa13.85□□□□□ -0.19
TRAF4-203ENST00000394925 OR2T35Q8NGX2 323 aa13.85□□□□□ -0.19
TRAF4-203ENST00000394925 PARLQ9H300 379 aa13.85□□□□□ -0.19
TRAF4-203ENST00000394925 Q9UF83 564 aa13.85□□□□□ -0.19
TRAF4-203ENST00000394925 PSG8Q9UQ74 426 aa13.85□□□□□ -0.19
TRAF4-203ENST00000394925 SERTM2A0A1B0GWG4 89 aa13.84□□□□□ -0.19
TRAF4-203ENST00000394925 OXTP01178 125 aa13.84□□□□□ -0.19
TRAF4-203ENST00000394925 Q8N976 141 aa13.84□□□□□ -0.19
TRAF4-203ENST00000394925 ENKURQ8TC29 256 aa13.84□□□□□ -0.19
TRAF4-203ENST00000394925 RMI2Q96E14 147 aa13.84□□□□□ -0.19
TRAF4-203ENST00000394925 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
TRAF4-203ENST00000394925 WFDC1Q9HC57 220 aa13.84□□□□□ -0.19
TRAF4-203ENST00000394925 IGKV2D-24A0A075B6R9 120 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 MPC2O95563 127 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 TCRAP04437 139 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 ARL14EPLP0DKL9 152 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 LGALSLQ3ZCW2 172 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-203ENST00000394925 SMUG1Q53HV7 270 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 ZFP2Q6ZN57 461 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 CYB561D1Q8N8Q1 229 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 OR10G9Q8NGN4 311 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 OR10G7Q8NGN6 311 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 CIRBP-AS1Q8TBR5 109 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 SAMD10Q9BYL1 202 aa13.83□□□□□ -0.2
TRAF4-203ENST00000394925 A0A087WWC5 75 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 RNF222A6NCQ9 220 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 A8MWV9 139 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 K7EQM0 130 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 ZFP69Q49AA0 526 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 PRNTQ86SH4 94 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 C5orf17Q8NAS9 161 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 PLA2G2DQ9UNK4 145 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 URGCP-MRPS24S4R325 110 aa13.82□□□□□ -0.2
TRAF4-203ENST00000394925 PET100P0DJ07 73 aa13.81□□□□□ -0.2
TRAF4-203ENST00000394925 C14orf178Q8N769 122 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-203ENST00000394925 PKHD1L1Q86WI1 4243 aa13.8□□□□□ -0.2
TRAF4-203ENST00000394925 IGLV2-11P01706 119 aa13.8□□□□□ -0.2
TRAF4-203ENST00000394925 S100A4P26447 101 aaKnown RBP13.8□□□□□ -0.2
TRAF4-203ENST00000394925 FLI1Q01543 452 aaPredicted RBP13.8□□□□□ -0.2
TRAF4-203ENST00000394925 LINC00479Q96M42 142 aa13.8□□□□□ -0.2
TRAF4-203ENST00000394925 JPT2Q9H910 190 aa13.8□□□□□ -0.2
TRAF4-203ENST00000394925 KLK12Q9UKR0 248 aa13.8□□□□□ -0.2
TRAF4-203ENST00000394925 CDC34P49427 236 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-203ENST00000394925 FGF8P55075 233 aaPredicted RBP13.79□□□□□ -0.2
TRAF4-203ENST00000394925 NIT1Q86X76 327 aa13.79□□□□□ -0.2
TRAF4-203ENST00000394925 IGKV3D-20A0A0C4DH25 116 aa13.78□□□□□ -0.2
TRAF4-203ENST00000394925 INMT-MINDY4F8WBC2 141 aa13.78□□□□□ -0.2
TRAF4-203ENST00000394925 SUMO1P63165 101 aaKnown RBP13.78□□□□□ -0.2
TRAF4-203ENST00000394925 UBE2WQ96B02 151 aa13.78□□□□□ -0.2
TRAF4-203ENST00000394925 SEC11BP0C7V7 166 aa13.77□□□□□ -0.21
TRAF4-203ENST00000394925 STAG3L2P0CL84 134 aa13.77□□□□□ -0.21
TRAF4-203ENST00000394925 STAG3L3P0CL85 134 aa13.77□□□□□ -0.21
TRAF4-203ENST00000394925 PIK3CD-AS1Q5SR53 167 aa13.77□□□□□ -0.21
TRAF4-203ENST00000394925 UFSP1Q6NVU6 142 aa13.77□□□□□ -0.21
TRAF4-203ENST00000394925 EPDR1Q9UM22 224 aa13.77□□□□□ -0.21
TRAF4-203ENST00000394925 SSNA1O43805 119 aa13.76□□□□□ -0.21
TRAF4-203ENST00000394925 IGLV2-8P01709 118 aa13.76□□□□□ -0.21
TRAF4-203ENST00000394925 GCHFRP30047 84 aa13.76□□□□□ -0.21
TRAF4-203ENST00000394925 ASIPP42127 132 aa13.76□□□□□ -0.21
TRAF4-203ENST00000394925 SAPCD1Q5SSQ6 148 aa13.76□□□□□ -0.21
TRAF4-203ENST00000394925 SUN5Q8TC36 379 aa13.76□□□□□ -0.21
TRAF4-203ENST00000394925 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
TRAF4-203ENST00000394925 RAB24Q969Q5 203 aa13.75□□□□□ -0.21
TRAF4-203ENST00000394925 NDUFA13Q9P0J0 144 aa13.75□□□□□ -0.21
TRAF4-203ENST00000394925 A0A087WX48 190 aa13.74□□□□□ -0.21
TRAF4-203ENST00000394925 TRAV34A0A0B4J273 112 aa13.73□□□□□ -0.21
TRAF4-203ENST00000394925 FABP5P3A8MUU1 101 aa13.73□□□□□ -0.21
TRAF4-203ENST00000394925 H3BVH4 76 aa13.73□□□□□ -0.21
TRAF4-203ENST00000394925 FAM74A4Q5TZK3 123 aa13.73□□□□□ -0.21
TRAF4-203ENST00000394925 S100ZQ8WXG8 99 aa13.73□□□□□ -0.21
TRAF4-203ENST00000394925 IL36BQ9NZH7 164 aa13.73□□□□□ -0.21
TRAF4-203ENST00000394925 RHODO00212 210 aa13.72□□□□□ -0.21
TRAF4-203ENST00000394925 UPK1BO75841 260 aa13.72□□□□□ -0.21
TRAF4-203ENST00000394925 RPL37AP61513 92 aaKnown RBP13.72□□□□□ -0.21
TRAF4-203ENST00000394925 ELOBQ15370 118 aa13.72□□□□□ -0.21
TRAF4-203ENST00000394925 HSD17B11Q8NBQ5 300 aa13.72□□□□□ -0.21
TRAF4-203ENST00000394925 OR2G3Q8NGZ4 309 aa13.72□□□□□ -0.21
TRAF4-203ENST00000394925 B4DEV8 164 aa13.71□□□□□ -0.21
TRAF4-203ENST00000394925 KCNIP4Q6PIL6 250 aa13.71□□□□□ -0.21
TRAF4-203ENST00000394925 ATRAIDQ6UW56 229 aa13.71□□□□□ -0.21
TRAF4-203ENST00000394925 MARVELD1Q9BSK0 173 aa13.71□□□□□ -0.21
TRAF4-203ENST00000394925 CHCHD7Q9BUK0 85 aa13.71□□□□□ -0.21
TRAF4-203ENST00000394925 TMEM167BQ9NRX6 74 aa13.71□□□□□ -0.21
TRAF4-203ENST00000394925 ARL2-SNX15V9GYD0 113 aa13.71□□□□□ -0.21
TRAF4-203ENST00000394925 A0A087WWL8 130 aa13.7□□□□□ -0.22
TRAF4-203ENST00000394925 IFITM3Q01628 133 aa13.7□□□□□ -0.22
TRAF4-203ENST00000394925 C14orf177Q52M58 125 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms