RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
SFMBT1-201ENST00000394752 IGHV4-59P01825 116 aa11.35□□□□□ -0.59
SFMBT1-201ENST00000394752 WI2-2373I1.2A0A1W2PRP0 233 aa11.35□□□□□ -0.59
SFMBT1-201ENST00000394752 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
SFMBT1-201ENST00000394752 YAE1D1Q9NRH1 226 aa11.35□□□□□ -0.59
SFMBT1-201ENST00000394752 A0A1B0GXF2 115 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 ZNF462Q96JM2 2506 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 IGHV4-30-2A0A087WSY4 118 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 SLC25A16P16260 332 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 SMAGPQ0VAQ4 97 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 TET2Q6N021 2002 aaPredicted RBP11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 TMEM262E9PQX1 116 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
SFMBT1-201ENST00000394752 SPXQ9BT56 116 aa11.33□□□□□ -0.6
SFMBT1-201ENST00000394752 PF4P02776 101 aa11.33□□□□□ -0.6
SFMBT1-201ENST00000394752 IGHV3-16A0A0C4DH30 117 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 OCIAD2Q56VL3 154 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 LINC01545Q5VT33 79 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 LINC01356Q8N9X3 169 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 GAGE1Q13065 139 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 XCL2Q9UBD3 114 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 UNQ9165/PRO28630Q6UXU0 137 aa11.32□□□□□ -0.6
SFMBT1-201ENST00000394752 TCTEX1D4Q5JR98 221 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 IGHV7-4-1A0A0J9YVY3 117 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 LINC00310P59036 64 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 LMO4P61968 165 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 PRADC1Q9BSG0 188 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
SFMBT1-201ENST00000394752 VWC2LB2RUY7 222 aa11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 F8VRH5 84 aa11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 C9orf118A6NHY6 69 aa11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 C5orf56Q8N8D9 126 aa11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 OR13C6PQ8NH95 151 aa11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 GTSF1LQ9H1H1 148 aa11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 MAP1AP78559 2803 aaPredicted RBP11.3□□□□□ -0.6
SFMBT1-201ENST00000394752 H3BRM9 83 aa11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 DEFB125Q8N687 156 aa11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 C10orf105Q8TEF2 133 aa11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 ZNF292O60281 2723 aa11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 CRIP1P50238 77 aa11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 DSPP15924 2871 aaKnown RBP11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 PRB1P04280 392 aa11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 DOPEY1Q5JWR5 2465 aa11.29□□□□□ -0.6
SFMBT1-201ENST00000394752 GATA3P23771 443 aa11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 RNASE13Q5GAN3 156 aaKnown RBP11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 ADAMTSL5Q6ZMM2 481 aa11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 IGHV3-38A0A0C4DH36 116 aa11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 RNASE1P07998 156 aaKnown RBP11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 CDKN1BP46527 198 aa11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 SAP30O75446 220 aa11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
SFMBT1-201ENST00000394752 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.6
SFMBT1-201ENST00000394752 MYCNOSP40205 109 aa11.27□□□□□ -0.6
SFMBT1-201ENST00000394752 Q71RC1 249 aaPredicted RBP11.27□□□□□ -0.6
SFMBT1-201ENST00000394752 SCRT2Q9NQ03 307 aa11.27□□□□□ -0.6
SFMBT1-201ENST00000394752 IGHV1OR15-1A0A075B7D0 117 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 PRSS29PA6NIE9 313 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 LINC01549A6NIU2 74 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 HTN3P15516 51 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 TRAV13-1A0A0B4J241 112 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 K7EP13 123 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 CCDC140Q96MF4 163 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 TRBV25-1A0A075B6N4 114 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 TMEM101Q96IK0 257 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
SFMBT1-201ENST00000394752 NBEAQ8NFP9 2946 aa11.26□□□□□ -0.61
SFMBT1-201ENST00000394752 RNASE8Q8TDE3 154 aaKnown RBP11.26□□□□□ -0.61
SFMBT1-201ENST00000394752 TRGV4A0A0C4DH28 118 aa11.26□□□□□ -0.61
SFMBT1-201ENST00000394752 H3BMG7 143 aa11.26□□□□□ -0.61
SFMBT1-201ENST00000394752 SNCGO76070 127 aa11.26□□□□□ -0.61
SFMBT1-201ENST00000394752 Q5PR19 223 aa11.26□□□□□ -0.61
SFMBT1-201ENST00000394752 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 PAX2Q02962 417 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 ZNF48Q96MX3 618 aaPredicted RBP11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 ADARB2-AS1A8MUL3 147 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 IGF1P05019 195 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 ZNF415Q09FC8 603 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 PMVKQ15126 192 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 A0A087WX48 190 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 A0A1W2PPR1 153 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
SFMBT1-201ENST00000394752 RBAKDNA6NC62 111 aa11.24□□□□□ -0.61
SFMBT1-201ENST00000394752 CTRLP40313 264 aa11.24□□□□□ -0.61
SFMBT1-201ENST00000394752 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
SFMBT1-201ENST00000394752 MYMXA0A1B0GTQ4 84 aa11.24□□□□□ -0.61
SFMBT1-201ENST00000394752 A8MWV9 139 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms