RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ANKRD29Q8N6D5 301 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 NPBQ8NG41 125 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 PPDPFLQ8WWR9 84 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 PLEKHB2Q96CS7 222 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 AAMDCQ9H7C9 122 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 SETD2Q9BYW2 2564 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-204ENST00000394164 ATP5LO75964 103 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 CTSGP08311 255 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 NHLRC4P0CG21 123 aaPredicted RBP7.65□□□□□ -1.18
PSEN1-204ENST00000394164 EMP1P54849 157 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 RNF5Q99942 180 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 SORL1Q92673 2214 aa7.65□□□□□ -1.18
PSEN1-204ENST00000394164 MYMXA0A1B0GTQ4 84 aa7.65□□□□□ -1.19
PSEN1-204ENST00000394164 J3KRW8 73 aa7.65□□□□□ -1.19
PSEN1-204ENST00000394164 TCL1BO95988 128 aa7.65□□□□□ -1.19
PSEN1-204ENST00000394164 ERCC8Q13216 396 aa7.65□□□□□ -1.19
PSEN1-204ENST00000394164 LY6EQ16553 131 aa7.65□□□□□ -1.19
PSEN1-204ENST00000394164 KLHL30-AS1Q8NEE0 82 aa7.65□□□□□ -1.19
PSEN1-204ENST00000394164 EPG5Q9HCE0 2579 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 IGKV3-7A0A075B6H7 116 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 TRAV8-2A0A0B4J237 113 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 CRLF1O75462 422 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 SRSF1Q07955 248 aaKnown RBP eCLIP7.64□□□□□ -1.19
PSEN1-204ENST00000394164 TMEM78Q5T7P6 136 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 Q8N9W7 124 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 NRGNQ92686 78 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 TRAV4A0A0B4J268 109 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 LGALS1P09382 135 aaKnown RBP7.64□□□□□ -1.19
PSEN1-204ENST00000394164 ZNF688P0C7X2 276 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 RPL32P62910 135 aaKnown RBP7.64□□□□□ -1.19
PSEN1-204ENST00000394164 DTX2Q86UW9 622 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 TMEM14CQ9P0S9 112 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 DOPEY1Q5JWR5 2465 aa7.64□□□□□ -1.19
PSEN1-204ENST00000394164 ZNF815PA8K554 130 aa7.63□□□□□ -1.19
PSEN1-204ENST00000394164 TEN1Q86WV5 123 aa7.63□□□□□ -1.19
PSEN1-204ENST00000394164 PIFOQ8TCI5 191 aa7.63□□□□□ -1.19
PSEN1-204ENST00000394164 ITLN2Q8WWU7 325 aaPredicted RBP7.63□□□□□ -1.19
PSEN1-204ENST00000394164 SIRPDQ9H106 197 aa7.63□□□□□ -1.19
PSEN1-204ENST00000394164 NXT2Q9NPJ8 142 aaKnown RBP7.63□□□□□ -1.19
PSEN1-204ENST00000394164 MYO9AB2RTY4 2548 aa7.63□□□□□ -1.19
PSEN1-204ENST00000394164 PRAC2D3DTV9 90 aa7.63□□□□□ -1.19
PSEN1-204ENST00000394164 TAL2Q16559 108 aa7.63□□□□□ -1.19
PSEN1-204ENST00000394164 ANKRD17O75179 2603 aaKnown RBP7.63□□□□□ -1.19
PSEN1-204ENST00000394164 SONP18583 2426 aaKnown RBP7.63□□□□□ -1.19
PSEN1-204ENST00000394164 A0A087WX48 190 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 A8MWV9 139 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 SLC25A16P16260 332 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 PRR25Q96S07 402 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 MRPS12O15235 138 aaKnown RBP7.62□□□□□ -1.19
PSEN1-204ENST00000394164 LMO4P61968 165 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE2BQ13066 116 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE2EQ4V326 116 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 TTC32Q5I0X7 151 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 ATP6V0E2Q8NHE4 81 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 RAX2Q96IS3 184 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE2DQ9UEU5 116 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 SMAD5-AS1Q9Y6J3 95 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 A6NJY4 79 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 BRI3O95415 125 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 LAGE3Q14657 143 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 Q6ZQT7 251 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 TRPT1Q86TN4 253 aaKnown RBP7.62□□□□□ -1.19
PSEN1-204ENST00000394164 PRADC1Q9BSG0 188 aa7.62□□□□□ -1.19
PSEN1-204ENST00000394164 SNCGO76070 127 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 IGHV4-39P01824 125 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 CRIP2P52943 208 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-204ENST00000394164 NDUFV3P56181 108 aaKnown RBP7.61□□□□□ -1.19
PSEN1-204ENST00000394164 DEFB1P60022 68 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 FAM159AQ6UWV7 190 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 Q8N8P6 123 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 CCDC168Q8NDH2 2452 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE12JA6NER3 117 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE7O76087 117 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 IGHV3-11P01762 117 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE12FP0CL80 117 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE12GP0CL81 117 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE12IP0CL82 117 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 GAGE4Q13068 117 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 Q8N6K4 173 aa7.61□□□□□ -1.19
PSEN1-204ENST00000394164 CENPVL3A0A0U1RRI6 287 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 C9JAW5 83 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 NPFFO15130 113 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 IGLC6P0CF74 106 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 NAV2Q8IVL1 2488 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 UBE2E1P51965 193 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 ZNF575Q86XF7 245 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 NOTCH3Q9UM47 2321 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 IGHV4-61A0A0C4DH41 118 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 TRBV6-1A0A0K0K1D8 114 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 RPL7P18124 248 aaKnown RBP7.6□□□□□ -1.19
PSEN1-204ENST00000394164 PLNP26678 52 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 MAPK1IP1LQ8NDC0 245 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 SCGB3A1Q96QR1 104 aa7.6□□□□□ -1.19
PSEN1-204ENST00000394164 BEX4Q9NWD9 120 aaPredicted RBP7.6□□□□□ -1.19
PSEN1-204ENST00000394164 H7C1H1 209 aa7.59□□□□□ -1.19
PSEN1-204ENST00000394164 MINOS1Q5TGZ0 78 aa7.59□□□□□ -1.19
PSEN1-204ENST00000394164 HIF1ANQ9NWT6 349 aa7.59□□□□□ -1.19
PSEN1-204ENST00000394164 MINOS1-NBL1R4GNA1 71 aa7.59□□□□□ -1.19
PSEN1-204ENST00000394164 IGLV2-18A0A075B6J9 118 aa7.59□□□□□ -1.19
PSEN1-204ENST00000394164 FABP5P3A8MUU1 101 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms