RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
CASP3-202ENST00000393585 TMEM61Q8N0U2 210 aa8.18□□□□□ -1.1
CASP3-202ENST00000393585 H0Y8G0 127 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 RNASE3P12724 160 aaKnown RBP8.17□□□□□ -1.1
CASP3-202ENST00000393585 SPINK13Q1W4C9 94 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 LINC01006Q8NI28 216 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 NDUFAF3Q9BU61 184 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 TMEM70Q9BUB7 260 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 SNHG12Q9BXW3 62 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 PEMTQ9UBM1 199 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 IGHV4-4A0A075B6R2 117 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 MAJINQ3KP22 176 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 SMIM15Q7Z3B0 74 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 RAX2Q96IS3 184 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 MCRIP2Q9BUT9 160 aaKnown RBP8.17□□□□□ -1.1
CASP3-202ENST00000393585 PHLDA3Q9Y5J5 127 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
CASP3-202ENST00000393585 MUC4Q99102 2169 aa8.17□□□□□ -1.1
CASP3-202ENST00000393585 A0A096LNJ9 63 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 KNCNA6PVL3 124 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 TCF21O43680 179 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 TNFRSF6BO95407 300 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 RNASE1P07998 156 aaKnown RBP8.16□□□□□ -1.1
CASP3-202ENST00000393585 DEFB131AP59861 70 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 CACNG7P62955 275 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 FAM159AQ6UWV7 190 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 CITED2Q99967 270 aaPredicted RBP8.16□□□□□ -1.1
CASP3-202ENST00000393585 C7orf71A4D174 169 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 NUTF2P61970 127 aaKnown RBP8.16□□□□□ -1.1
CASP3-202ENST00000393585 DYNLRB2Q8TF09 96 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 PPBPP02775 128 aa8.16□□□□□ -1.1
CASP3-202ENST00000393585 SETXQ7Z333 2677 aaKnown RBP8.15□□□□□ -1.1
CASP3-202ENST00000393585 CD7P09564 240 aa8.15□□□□□ -1.1
CASP3-202ENST00000393585 LEPP41159 167 aa8.15□□□□□ -1.1
CASP3-202ENST00000393585 CDKN1BP46527 198 aa8.15□□□□□ -1.1
CASP3-202ENST00000393585 SPATA45Q537H7 98 aa8.15□□□□□ -1.1
CASP3-202ENST00000393585 FOXI2Q6ZQN5 318 aa8.15□□□□□ -1.1
CASP3-202ENST00000393585 C14orf178Q8N769 122 aaPredicted RBP8.15□□□□□ -1.1
CASP3-202ENST00000393585 ZNF418Q8TF45 676 aaPredicted RBP8.15□□□□□ -1.1
CASP3-202ENST00000393585 MAP1LC3AQ9H492 121 aa8.15□□□□□ -1.1
CASP3-202ENST00000393585 SCRT2Q9NQ03 307 aa8.15□□□□□ -1.11
CASP3-202ENST00000393585 HILS1P60008 231 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 CD300EQ496F6 205 aaPredicted RBP8.14□□□□□ -1.11
CASP3-202ENST00000393585 AMTNQ6UX39 209 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 ODF3Q96PU9 254 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 PMCHL2Q9BQD1 86 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 C20orf144Q9BQM9 153 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 MAP1LC3CQ9BXW4 147 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 CCL24O00175 119 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 DUSP14O95147 198 aaKnown RBP8.14□□□□□ -1.11
CASP3-202ENST00000393585 LY6G6DO95868 133 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 DEFB114Q30KQ6 69 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 OR2K2Q8NGT1 345 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 ZNF747Q9BV97 191 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 HSPB8Q9UJY1 196 aa8.14□□□□□ -1.11
CASP3-202ENST00000393585 OR4C46A6NHA9 309 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 CRXO43186 299 aaPredicted RBP8.13□□□□□ -1.11
CASP3-202ENST00000393585 MED14OSP0DP75 135 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
CASP3-202ENST00000393585 SCGB2A2Q13296 93 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 FHL3Q13643 280 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 ZNF705AQ6ZN79 300 aaPredicted RBP8.13□□□□□ -1.11
CASP3-202ENST00000393585 NRACQ8N912 160 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 MGPP08493 103 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 C16orf95Q9H693 158 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 JPT2Q9H910 190 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
CASP3-202ENST00000393585 HBDP02042 147 aa8.12□□□□□ -1.11
CASP3-202ENST00000393585 Q8N1Y9 231 aa8.12□□□□□ -1.11
CASP3-202ENST00000393585 DPH3P1Q9H4G8 78 aa8.12□□□□□ -1.11
CASP3-202ENST00000393585 MDFICQ9P1T7 246 aa8.12□□□□□ -1.11
CASP3-202ENST00000393585 TSPOP30536 169 aa8.12□□□□□ -1.11
CASP3-202ENST00000393585 BATFQ16520 125 aa8.12□□□□□ -1.11
CASP3-202ENST00000393585 LBHQ53QV2 105 aaPredicted RBP8.12□□□□□ -1.11
CASP3-202ENST00000393585 MAP6D1Q9H9H5 199 aa8.12□□□□□ -1.11
CASP3-202ENST00000393585 TSSC4Q9Y5U2 329 aaPredicted RBP8.12□□□□□ -1.11
CASP3-202ENST00000393585 RBMY1BA6NDE4 496 aaKnown RBP8.11□□□□□ -1.11
CASP3-202ENST00000393585 RBMY1EA6NEQ0 496 aaKnown RBP8.11□□□□□ -1.11
CASP3-202ENST00000393585 H3BMM0 161 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 RBMY1DP0C7P1 496 aaKnown RBP8.11□□□□□ -1.11
CASP3-202ENST00000393585 RBMY1A1P0DJD3 496 aaKnown RBP8.11□□□□□ -1.11
CASP3-202ENST00000393585 RBMY1CP0DJD4 496 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 HLA-DRB4P13762 266 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 RBMY1FQ15415 496 aaKnown RBP8.11□□□□□ -1.11
CASP3-202ENST00000393585 AP1S3Q96PC3 154 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 NXT2Q9NPJ8 142 aaKnown RBP8.11□□□□□ -1.11
CASP3-202ENST00000393585 TMEM160Q9NX00 188 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 HLA-DRB4X5D2U9 266 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 IGLV2-18A0A075B6J9 118 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 IGHV1OR15-1A0A075B7D0 117 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 MIEN1Q9BRT3 115 aa8.11□□□□□ -1.11
CASP3-202ENST00000393585 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
CASP3-202ENST00000393585 IGHV3-16A0A0C4DH30 117 aa8.1□□□□□ -1.11
CASP3-202ENST00000393585 C20orf202A1L168 122 aa8.1□□□□□ -1.11
CASP3-202ENST00000393585 HTN1P15515 57 aa8.1□□□□□ -1.11
CASP3-202ENST00000393585 IGLL1P15814 213 aa8.1□□□□□ -1.11
CASP3-202ENST00000393585 PET117Q6UWS5 81 aa8.1□□□□□ -1.11
CASP3-202ENST00000393585 RPL39LQ96EH5 51 aaKnown RBP8.1□□□□□ -1.11
CASP3-202ENST00000393585 MRAP2Q96G30 205 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms