RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 GOLT1BQ9Y3E0 138 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 MYO9AB2RTY4 2548 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 TRAV26-2A0A0B4J265 109 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 GNRH2O43555 120 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 ZNF688P0C7X2 276 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 PSMG4Q5JS54 123 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 TMEM86BQ8N661 226 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 DPF1Q92782 380 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 PHLDA3Q9Y5J5 127 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 ITPR3Q14573 2671 aa6.76□□□□□ -1.33
TDP1-202ENST00000393452 M0R381 172 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 LEPP41159 167 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 GAGE1Q13065 139 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 ADAMTSL5Q6ZMM2 481 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 WFDC11Q8NEX6 87 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 DUX5Q96PT3 197 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 DPH3P1Q9H4G8 78 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 SONP18583 2426 aaKnown RBP6.75□□□□□ -1.33
TDP1-202ENST00000393452 TFPI2P48307 235 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 COL5A1-AS1Q5SY13 56 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 TEX29Q8N6K0 151 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 POM121L12Q8N7R1 296 aa6.75□□□□□ -1.33
TDP1-202ENST00000393452 CYSRT1A8MQ03 144 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 SLC25A34Q6PIV7 304 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 STPG4Q8N801 248 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 CBY1Q9Y3M2 126 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 HECTD1Q9ULT8 2610 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 ZNF469Q96JG9 3925 aaPredicted RBP6.74□□□□□ -1.33
TDP1-202ENST00000393452 C7orf71A4D174 169 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 SPRY2O43597 315 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 CD5LO43866 347 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 BATFQ16520 125 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 TCTEX1D4Q5JR98 221 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 FAM159AQ6UWV7 190 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 C4orf3Q8WVX3 66 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 TMEM158Q8WZ71 300 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 RASL10AQ92737 203 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 TP73-AS1Q9UF72 201 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 CCDC168Q8NDH2 2452 aa6.74□□□□□ -1.33
TDP1-202ENST00000393452 COX8AP10176 69 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 LAGE3Q14657 143 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 C14orf178Q8N769 122 aaPredicted RBP6.73□□□□□ -1.33
TDP1-202ENST00000393452 AP1S3Q96PC3 154 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 C20orf78Q9BR46 151 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 KIF25-AS1Q9Y6Z4 181 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 TRAV12-3A0A0B4J271 114 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 LINC01619G3V211 115 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 SLURP1P55000 103 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 LINC00315P59091 139 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 DEFB136Q30KP8 78 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 FOXI2Q6ZQN5 318 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 OR1N2Q8NGR9 330 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 ZMAT4Q9H898 229 aa6.73□□□□□ -1.33
TDP1-202ENST00000393452 K7EMI3 77 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 DUSP14O95147 198 aaKnown RBP6.72□□□□□ -1.33
TDP1-202ENST00000393452 SMIM17P0DL12 118 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 CDKN1BP46527 198 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 SUMO2P61956 95 aaKnown RBP6.72□□□□□ -1.33
TDP1-202ENST00000393452 ODF1Q14990 250 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 AMTNQ6UX39 209 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 WFDC12Q8WWY7 111 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 C18orf15Q96N68 181 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 TRAV2A0A0B4J234 112 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 CD7P09564 240 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 HINT1P49773 126 aaPredicted RBP6.72□□□□□ -1.33
TDP1-202ENST00000393452 Q6ZSV7 163 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 OR11H1Q8NG94 326 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 OR9G4Q8NGQ1 327 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 DKK2Q9UBU2 259 aa6.72□□□□□ -1.33
TDP1-202ENST00000393452 IGHV3-16A0A0C4DH30 117 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 A8MTW9 85 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 ATP5LO75964 103 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 PPP1R17O96001 155 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 FGF6P10767 208 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 KRTAP1-1Q07627 177 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 PEMTQ9UBM1 199 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 FLNAP21333 2647 aaKnown RBP6.71□□□□□ -1.34
TDP1-202ENST00000393452 TRAV12-2A0A075B6T6 113 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 DNAJC9-AS1A6NH13 148 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 COTL1Q14019 142 aa6.71□□□□□ -1.34
TDP1-202ENST00000393452 RPL39LQ96EH5 51 aaKnown RBP6.71□□□□□ -1.34
TDP1-202ENST00000393452 IGKV3-20P01619 116 aa6.7□□□□□ -1.34
TDP1-202ENST00000393452 RPL32P62910 135 aaKnown RBP6.7□□□□□ -1.34
TDP1-202ENST00000393452 SPINK13Q1W4C9 94 aa6.7□□□□□ -1.34
TDP1-202ENST00000393452 ORMDL2Q53FV1 153 aa6.7□□□□□ -1.34
TDP1-202ENST00000393452 MPV17L2Q567V2 206 aa6.7□□□□□ -1.34
TDP1-202ENST00000393452 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
TDP1-202ENST00000393452 HHLA3Q9XRX5 114 aa6.7□□□□□ -1.34
TDP1-202ENST00000393452 IGHV1OR15-1A0A075B7D0 117 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 PRSS1P07477 247 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 MGPP08493 103 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 BOD1L2Q8IYS8 172 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 Q8N1Y9 231 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 MDFICQ9P1T7 246 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 C12orf54Q6X4T0 127 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 TMEM61Q8N0U2 210 aa6.69□□□□□ -1.34
TDP1-202ENST00000393452 KLHL30-AS1Q8NEE0 82 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms