RNA–Protein interactions for RNA: ENST00000392396.7

TFRC-202, Transcript of transferrin receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TFRC, Length 5,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-202ENST00000392396 COL4A3Q01955 1670 aa13.9□□□□□ -0.18
TFRC-202ENST00000392396 RPL32P62910 135 aaKnown RBP13.9□□□□□ -0.18
TFRC-202ENST00000392396 C10orf126Q8N4M7 172 aa13.9□□□□□ -0.18
TFRC-202ENST00000392396 CAMK2N2Q96S95 79 aa13.9□□□□□ -0.18
TFRC-202ENST00000392396 SMIM2Q9BVW6 85 aa13.9□□□□□ -0.18
TFRC-202ENST00000392396 NCKAP5O14513 1909 aa13.9□□□□□ -0.18
TFRC-202ENST00000392396 WNK1Q9H4A3 2382 aa13.9□□□□□ -0.19
TFRC-202ENST00000392396 DEFB4AO15263 64 aa13.89□□□□□ -0.19
TFRC-202ENST00000392396 SMIM9A6NGZ8 99 aa13.89□□□□□ -0.19
TFRC-202ENST00000392396 C17orf77Q96MU5 243 aa13.89□□□□□ -0.19
TFRC-202ENST00000392396 TEX22C9J3V5 150 aa13.88□□□□□ -0.19
TFRC-202ENST00000392396 HSD52Q0P140 79 aa13.88□□□□□ -0.19
TFRC-202ENST00000392396 SFTA2Q6UW10 78 aa13.88□□□□□ -0.19
TFRC-202ENST00000392396 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.88□□□□□ -0.19
TFRC-202ENST00000392396 FREM1Q5H8C1 2179 aa13.88□□□□□ -0.19
TFRC-202ENST00000392396 TIRAPP58753 221 aa13.88□□□□□ -0.19
TFRC-202ENST00000392396 PRO0255Q9UI72 69 aa13.88□□□□□ -0.19
TFRC-202ENST00000392396 SPCS1Q9Y6A9 102 aa13.88□□□□□ -0.19
TFRC-202ENST00000392396 LGALS9O00182 355 aa13.87□□□□□ -0.19
TFRC-202ENST00000392396 TAL2Q16559 108 aa13.87□□□□□ -0.19
TFRC-202ENST00000392396 MRPL51Q4U2R6 128 aaKnown RBP13.87□□□□□ -0.19
TFRC-202ENST00000392396 AMTNQ6UX39 209 aa13.87□□□□□ -0.19
TFRC-202ENST00000392396 TMEM263Q8WUH6 116 aaKnown RBP13.87□□□□□ -0.19
TFRC-202ENST00000392396 MAP6D1Q9H9H5 199 aa13.86□□□□□ -0.19
TFRC-202ENST00000392396 RPL18AQ02543 176 aaKnown RBP13.86□□□□□ -0.19
TFRC-202ENST00000392396 TRAV26-2A0A0B4J265 109 aa13.86□□□□□ -0.19
TFRC-202ENST00000392396 C22orf34Q6ZV56 151 aa13.86□□□□□ -0.19
TFRC-202ENST00000392396 ESDP10768 282 aa13.85□□□□□ -0.19
TFRC-202ENST00000392396 ORAOV1Q8WV07 137 aa13.85□□□□□ -0.19
TFRC-202ENST00000392396 COX11Q9Y6N1 276 aa13.85□□□□□ -0.19
TFRC-202ENST00000392396 LINC00518Q8N0U6 118 aa13.85□□□□□ -0.19
TFRC-202ENST00000392396 LINC01006Q8NI28 216 aa13.85□□□□□ -0.19
TFRC-202ENST00000392396 WI2-2373I1.2A0A1W2PRP0 233 aa13.84□□□□□ -0.19
TFRC-202ENST00000392396 SPANXA1Q9NS26 97 aa13.84□□□□□ -0.19
TFRC-202ENST00000392396 A8MWP6 167 aa13.84□□□□□ -0.19
TFRC-202ENST00000392396 LTAP01374 205 aa13.84□□□□□ -0.19
TFRC-202ENST00000392396 C11orf52Q96A22 123 aa13.84□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BKO60814 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BJP06899 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BOP23527 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BBP33778 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BDP58876 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BCP62807 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST2H2BEQ16778 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BHQ93079 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BNQ99877 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 HIST1H2BMQ99879 126 aa13.83□□□□□ -0.19
TFRC-202ENST00000392396 COX7A2LO14548 114 aa13.83□□□□□ -0.2
TFRC-202ENST00000392396 EML6Q6ZMW3 1958 aa13.83□□□□□ -0.2
TFRC-202ENST00000392396 PRRC2AP48634 2157 aaKnown RBP13.83□□□□□ -0.2
TFRC-202ENST00000392396 K7EMI3 77 aa13.83□□□□□ -0.2
TFRC-202ENST00000392396 LYRM9A8MSI8 78 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 LINC00574Q9H8X3 128 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 NDUFA12Q9UI09 145 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 DOCK11Q5JSL3 2073 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 DEFB131BA0A096LNP1 70 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 ODF3L1Q8IXM7 274 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 ZNF479Q96JC4 524 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 PSMG3-AS1Q96PY0 264 aa13.82□□□□□ -0.2
TFRC-202ENST00000392396 FANCD2OSQ96PS1 177 aa13.81□□□□□ -0.2
TFRC-202ENST00000392396 TLN1Q9Y490 2541 aaKnown RBP13.81□□□□□ -0.2
TFRC-202ENST00000392396 A0A0J9YX75 114 aa13.81□□□□□ -0.2
TFRC-202ENST00000392396 SYS1-DBNDD2H3BUS1 97 aa13.81□□□□□ -0.2
TFRC-202ENST00000392396 DEFB114Q30KQ6 69 aa13.81□□□□□ -0.2
TFRC-202ENST00000392396 C4orf48Q5BLP8 95 aa13.81□□□□□ -0.2
TFRC-202ENST00000392396 SORL1Q92673 2214 aa13.81□□□□□ -0.2
TFRC-202ENST00000392396 CYYR1Q96J86 154 aa13.81□□□□□ -0.2
TFRC-202ENST00000392396 MRPL36Q9P0J6 103 aaKnown RBP13.81□□□□□ -0.2
TFRC-202ENST00000392396 H3BUT2 72 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
TFRC-202ENST00000392396 UNQ9165/PRO28630Q6UXU0 137 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 PIEZO2Q9H5I5 2752 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 TRBV12-3P01733 135 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 C9orf47Q6ZRZ4 202 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 DYSFO75923 2080 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 PLXNB3Q9ULL4 1909 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 MIFP14174 115 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 SCRT2Q9NQ03 307 aa13.8□□□□□ -0.2
TFRC-202ENST00000392396 ETDCA0A1B0GVM5 59 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 Q8N1Y9 231 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 NDUFA7O95182 113 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 Q0VG73 95 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 TRBV7-3A0A075B6L6 115 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 TRAV8-2A0A0B4J237 113 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 CXCL1P09341 107 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 IGLV10-54A0A075B6I4 117 aa13.79□□□□□ -0.2
TFRC-202ENST00000392396 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.78□□□□□ -0.2
TFRC-202ENST00000392396 IGKV2-29A2NJV5 120 aaPredicted RBP13.78□□□□□ -0.2
TFRC-202ENST00000392396 WIPF3A6NGB9 483 aa13.78□□□□□ -0.2
TFRC-202ENST00000392396 JMJD1CQ15652 2540 aa13.78□□□□□ -0.2
TFRC-202ENST00000392396 hDV102S1A0JD36 115 aa13.78□□□□□ -0.2
TFRC-202ENST00000392396 NDUFA1O15239 70 aa13.78□□□□□ -0.2
TFRC-202ENST00000392396 ATRAIDQ6UW56 229 aa13.78□□□□□ -0.2
TFRC-202ENST00000392396 SLC25A29Q8N8R3 303 aa13.78□□□□□ -0.2
TFRC-202ENST00000392396 EBI3Q14213 229 aa13.77□□□□□ -0.2
TFRC-202ENST00000392396 C5orf38Q86SI9 138 aa13.77□□□□□ -0.2
TFRC-202ENST00000392396 TRAV10A0A0B4J240 114 aa13.77□□□□□ -0.21
TFRC-202ENST00000392396 A0A087X0K7 114 aa13.76□□□□□ -0.21
TFRC-202ENST00000392396 ZNF726P1Q15940 193 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms