RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 FGD6Q6ZV73 1430 aa-0.98□□□□□ -2.57
TRAJ28-201ENST00000390509 ZNF142P52746 1687 aaPredicted RBP-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 RREB1Q92766 1687 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 SYNJ2BP-COX16A0A087WUM0 186 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 CLDN24A6NM45 220 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM238C9JI98 176 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 M0R135 149 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 BIRC5O15392 142 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 GGCTO75223 188 aaKnown RBP-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 IFNA1P01562 189 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 HLA-DRB1P01911 266 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 TFF1P04155 84 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 SERPINA6P08185 405 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 PIRTP0C851 137 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 CYBAP13498 195 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 GAP43P17677 238 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 DYNLT3P51808 116 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 SLAMF1Q13291 335 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 COX17Q14061 63 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 SPCS2Q15005 226 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 RRN3P1Q2M238 152 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 C9orf116Q5BN46 136 aaPredicted RBP-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM170BQ5T4T1 132 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 LELP1Q5T871 98 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 LYRM7Q5U5X0 104 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 FAM151BQ6UXP7 276 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 SLC51BQ86UW2 128 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 FAM228AQ86W67 206 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 KRT222Q8N1A0 295 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 FAM81AQ8TBF8 368 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 TSEN15Q8WW01 171 aaKnown RBP-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 PP6455Q8WZ26 134 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 IFI27L1Q96BM0 104 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 RASD2Q96D21 266 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 MSANTD3Q96H12 275 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM237Q96Q45 408 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 SMIM7Q9BQ49 75 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 EXO5Q9H790 373 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 GEMIN7Q9H840 131 aaKnown RBP-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 TMBIM4Q9HC24 238 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 RMND1Q9NWS8 449 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 GCNT4Q9P109 453 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 ERG28Q9UKR5 140 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 IBTKQ9P2D0 1353 aaPredicted RBP-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 PLXNA2O75051 1894 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 CEP250Q9BV73 2442 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 ABCC10Q5T3U5 1492 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 TULP4Q9NRJ4 1543 aa-0.99□□□□□ -2.57
TRAJ28-201ENST00000390509 CEP350Q5VT06 3117 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 AFDNP55196 1824 aaKnown RBP-1□□□□□ -2.57
TRAJ28-201ENST00000390509 MMP24-AS1A0A0U1RRL7 71 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 CTXND1A0A1B0GTU2 59 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 FAM223BA6NKX1 122 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 HCG22E2RYF7 251 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 EDF1O60869 148 aaKnown RBP-1□□□□□ -2.57
TRAJ28-201ENST00000390509 IFNA6P05013 189 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 MGPP08493 103 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 CST2P09228 141 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 LIMS3P0CW19 117 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 LIMS4P0CW20 117 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 PVALBP20472 110 aaPredicted RBP-1□□□□□ -2.57
TRAJ28-201ENST00000390509 PEX19P40855 299 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 CARD18P57730 90 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 UBE2G2P60604 165 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 MYL6P60660 151 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 UBE2HP62256 183 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 COTL1Q14019 142 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 IL18Q14116 193 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 FKBP1CQ5VVH2 108 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 Q6Q795 121 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 Q6ZUT4 128 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 BLIDQ8IZY5 108 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 PDCL2Q8N4E4 241 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 TMEM86BQ8N661 226 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 ARL6IP6Q8N6S5 226 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 RNASEH2CQ8TDP1 164 aaKnown RBP-1□□□□□ -2.57
TRAJ28-201ENST00000390509 EEF1AKMT1Q8WVE0 214 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 CLEC2BQ92478 149 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 AP3S1Q92572 193 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 CERS2Q96G23 380 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 PHB2Q99623 299 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 CCDC77Q9BR77 488 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 LRTM1Q9HBL6 345 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 TVP23BQ9NYZ1 205 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 UBE2D4Q9Y2X8 147 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 R4GMQ9 66 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 RAD50Q92878 1312 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 NUP155O75694 1391 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 YTHDC2Q9H6S0 1430 aaKnown RBP-1□□□□□ -2.57
TRAJ28-201ENST00000390509 TRAPPC8Q9Y2L5 1435 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 NKTRP30414 1462 aaKnown RBP-1□□□□□ -2.57
TRAJ28-201ENST00000390509 CCDC141Q6ZP82 1450 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 MAGI2Q86UL8 1455 aa-1□□□□□ -2.57
TRAJ28-201ENST00000390509 ARHGEF28Q8N1W1 1705 aaKnown RBP-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TRPM7Q96QT4 1865 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 CHD5Q8TDI0 1954 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TRAV2A0A0B4J234 112 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 TRAV12-3A0A0B4J271 114 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 C5orf58C9J3I9 102 aa-1.01□□□□□ -2.57
TRAJ28-201ENST00000390509 H0Y8G0 127 aa-1.01□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms