RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 FANCD2OSQ96PS1 177 aa10.19□□□□□ -0.78
TRAPPC9-201ENST00000389328 FOXI1Q12951 378 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 TMEM141Q96I45 108 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 CCDC168Q8NDH2 2452 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 IGHV7-81A0A0B4J1V7 117 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 SPINK13Q1W4C9 94 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 SS18L2Q9UHA2 77 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 NCOR2Q9Y618 2525 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 H3BMM0 161 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 Q71RC1 249 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 UBE2WQ96B02 151 aa10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 DAZ1Q9NQZ3 744 aaKnown RBP10.18□□□□□ -0.78
TRAPPC9-201ENST00000389328 UBE2E1P51965 193 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 LY6G5BQ8NDX9 201 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 SORL1Q92673 2214 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 RNASE13Q5GAN3 156 aaKnown RBP10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 CCL19Q99731 98 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 FAM223BA6NKX1 122 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 FAM223AQ8IWN6 122 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 MAPKAPK5-AS1Q8N8E1 139 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 MYO9AB2RTY4 2548 aa10.17□□□□□ -0.78
TRAPPC9-201ENST00000389328 OTOGLQ3ZCN5 2332 aa10.16□□□□□ -0.78
TRAPPC9-201ENST00000389328 ZNF48Q96MX3 618 aaPredicted RBP10.16□□□□□ -0.78
TRAPPC9-201ENST00000389328 RBAKDNA6NC62 111 aa10.16□□□□□ -0.78
TRAPPC9-201ENST00000389328 CFC1BP0CG36 223 aa10.16□□□□□ -0.78
TRAPPC9-201ENST00000389328 CFC1P0CG37 223 aa10.16□□□□□ -0.78
TRAPPC9-201ENST00000389328 RPL39P62891 51 aaKnown RBP10.16□□□□□ -0.78
TRAPPC9-201ENST00000389328 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 TEN1Q86WV5 123 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 E9PLD3 99 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 LGALS1P09382 135 aaKnown RBP10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 SPANXB1Q9NS25 103 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 IGF2RP11717 2491 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 GAS8-AS1O95177 125 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 IGLC6P0CF74 106 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 NPBQ8NG41 125 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 USMG5Q96IX5 58 aa10.15□□□□□ -0.78
TRAPPC9-201ENST00000389328 A4D1N5 150 aa10.14□□□□□ -0.79
TRAPPC9-201ENST00000389328 BAALCQ8WXS3 180 aa10.14□□□□□ -0.79
TRAPPC9-201ENST00000389328 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
TRAPPC9-201ENST00000389328 TRAV13-1A0A0B4J241 112 aa10.14□□□□□ -0.79
TRAPPC9-201ENST00000389328 IFITM1P13164 125 aa10.14□□□□□ -0.79
TRAPPC9-201ENST00000389328 CRYBA4P53673 196 aa10.14□□□□□ -0.79
TRAPPC9-201ENST00000389328 C15orf53Q8NAA6 179 aa10.13□□□□□ -0.79
TRAPPC9-201ENST00000389328 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
TRAPPC9-201ENST00000389328 C11orf86A6NJI1 115 aa10.13□□□□□ -0.79
TRAPPC9-201ENST00000389328 ARHGAP32A7KAX9 2087 aa10.13□□□□□ -0.79
TRAPPC9-201ENST00000389328 ANKRD29Q8N6D5 301 aa10.13□□□□□ -0.79
TRAPPC9-201ENST00000389328 DSCAMO60469 2012 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 I3L3M4 83 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 SYNJ2BPP57105 145 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 MORN3Q6PF18 240 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 ABCA2Q9BZC7 2435 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE5Q13069 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE6Q13070 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 CEP192Q8TEP8 1941 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 EXPH5Q8NEV8 1989 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE7O76087 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 IGHV3-53P01767 116 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE4Q13068 117 aa10.12□□□□□ -0.79
TRAPPC9-201ENST00000389328 IGHV3-38A0A0C4DH36 116 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 NDUFA4O00483 81 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 PRIMA1Q86XR5 153 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 TRGV2A0A075B6R0 118 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 IGHV3-16A0A0C4DH30 117 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 Q8N9W7 124 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 RNF185Q96GF1 192 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 CARD19Q96LW7 228 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 A0A0J9YXV3 536 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 MT-ATP8P03928 68 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 HOXB4P17483 251 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 TOMM6Q96B49 74 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 MSRB2Q9Y3D2 182 aa10.11□□□□□ -0.79
TRAPPC9-201ENST00000389328 LY6DQ14210 128 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 MUSTN1Q8IVN3 82 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 U3KQK5 164 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 CRYGBP07316 175 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 LINC00158P58513 81 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 SUMO4Q6EEV6 95 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 IGHV1OR15-1A0A075B7D0 117 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 MRPL53Q96EL3 112 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 LENEPQ9Y5L5 61 aa10.1□□□□□ -0.79
TRAPPC9-201ENST00000389328 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 C11orf44Q8N8P7 122 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 INSL3P51460 131 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 PIP4P2Q8N4L2 257 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 GATD1Q8NB37 220 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 JPT2Q9H910 190 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 COL5A1P20908 1838 aaPredicted RBP10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 DEFB131AP59861 70 aa10.09□□□□□ -0.79
TRAPPC9-201ENST00000389328 PIP4P1Q86T03 277 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms