RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 IGHV3-7P01780 117 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 ADCYAP1P18509 176 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 DSCR9P59020 149 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 HSD52Q0P140 79 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 Q6P435 159 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 ZNF497Q6ZNH5 498 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 Q6ZR03 302 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 NRACQ8N912 160 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 RBMXL1Q96E39 390 aaKnown RBP4.11□□□□□ -1.75
ERCC4-202ENST00000389138 VSIG2Q96IQ7 327 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 IMUPQ9GZP8 106 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 DPM3Q9P2X0 92 aa4.11□□□□□ -1.75
ERCC4-202ENST00000389138 KMT2CQ8NEZ4 4911 aaKnown RBP4.11□□□□□ -1.75
ERCC4-202ENST00000389138 PRKDCP78527 4128 aaKnown RBP4.11□□□□□ -1.75
ERCC4-202ENST00000389138 IGHV3OR15-7A0A075B7D8 119 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 IGHV1-18A0A0C4DH31 117 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 LTAP01374 205 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 PRH1P02810 166 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 ZNF80P51504 273 aaPredicted RBP4.1□□□□□ -1.75
ERCC4-202ENST00000389138 LINC00205P59089 165 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 CXCL6P80162 114 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 DIAPH2-AS1Q14236 149 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 ORMDL2Q53FV1 153 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 SPRNQ5BIV9 151 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 MEIG1Q5JSS6 88 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 GPHB5Q86YW7 130 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 ZNF709Q8N972 641 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 GGTLC1Q9BX51 225 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 COX11Q9Y6N1 276 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 TAX1BP3O14907 124 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 IGKV3-15P01624 115 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 SEC11BP0C7V7 166 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 NFYBP25208 207 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 ATP6V0CP27449 155 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 KRTAP24-1Q3LI83 254 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 COA6Q5JTJ3 125 aaKnown RBP4.1□□□□□ -1.75
ERCC4-202ENST00000389138 OR2T10Q8NGZ9 312 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 ITLN1Q8WWA0 313 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 MRPS16Q9Y3D3 137 aaKnown RBP4.1□□□□□ -1.75
ERCC4-202ENST00000389138 FAM215AQ9Y5M1 114 aa4.1□□□□□ -1.75
ERCC4-202ENST00000389138 IQCF6A8MYZ5 107 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 LINC00869P0C866 280 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 IAPPP10997 89 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 DYNLT3P51808 116 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 C5orf17Q8NAS9 161 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 FAM213BQ8TBF2 198 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 SPIN2AQ99865 258 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 SPIN2BQ9BPZ2 258 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 CACNG5Q9UF02 275 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 TET2Q6N021 2002 aaPredicted RBP4.09□□□□□ -1.75
ERCC4-202ENST00000389138 TRRAPQ9Y4A5 3859 aa4.09□□□□□ -1.75
ERCC4-202ENST00000389138 RAI1Q7Z5J4 1906 aaPredicted RBP4.09□□□□□ -1.75
ERCC4-202ENST00000389138 A0A0J9YXY3 114 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 IGLL5B9A064 214 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 M0R378 163 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 CGAP01215 116 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 IGKV1-39P01597 117 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 IGKV1D-39P04432 117 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 SFTA3P0C7M3 94 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 KRTAP1-1Q07627 177 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 ZNF816Q0VGE8 651 aaPredicted RBP4.09□□□□□ -1.76
ERCC4-202ENST00000389138 SPINK9Q5DT21 86 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 NMSQ5H8A3 153 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 CASC10Q5T4H9 136 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 GTF2H5Q6ZYL4 71 aa4.09□□□□□ -1.76
ERCC4-202ENST00000389138 H1FXQ92522 213 aaKnown RBP4.09□□□□□ -1.76
ERCC4-202ENST00000389138 DSCAMO60469 2012 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 TRAV9-1A0A075B6T8 112 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 KRASP01116 189 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 IGKV1-5P01602 117 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 HERVK_113P61574 105 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 EIF5AP63241 154 aaKnown RBP4.08□□□□□ -1.76
ERCC4-202ENST00000389138 EIF5AL1Q6IS14 154 aaKnown RBP4.08□□□□□ -1.76
ERCC4-202ENST00000389138 ZNF880Q6PDB4 577 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 Q8IYB0 196 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 TEX29Q8N6K0 151 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 FER1L6-AS1Q8NA97 138 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 NEUROG1Q92886 237 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 LEAP2Q969E1 77 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 PRO1933Q9H354 126 aa4.08□□□□□ -1.76
ERCC4-202ENST00000389138 TMEM30CPA0ZSE6 113 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 C7orf71A4D174 169 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 IGLV2-23P01705 113 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 GZMBP10144 247 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 FOXA3P55318 350 aaPredicted RBP4.07□□□□□ -1.76
ERCC4-202ENST00000389138 EDDM3BP56851 147 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 RPL30P62888 115 aaKnown RBP4.07□□□□□ -1.76
ERCC4-202ENST00000389138 SLC35E3Q7Z769 313 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 CD177Q8N6Q3 437 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 DEFB108BQ8NET1 73 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 OR4A5Q8NH83 315 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 TOMM6Q96B49 74 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 DERL1Q9BUN8 251 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 ARFGEF3Q5TH69 2177 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 A0A087X002 238 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 TRBV6-6A0A0A6YYG2 114 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 TRBV7-6A0A0J9YX20 115 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 ZNF727A8MUV8 499 aa4.07□□□□□ -1.76
ERCC4-202ENST00000389138 IGLV1-44P01699 117 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms