RNA–Protein interactions for RNA: ENST00000381897.5

RFC1-202, Transcript of replication factor C subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFC1, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-202ENST00000381897 DAZ1Q9NQZ3 744 aaKnown RBP4.5□□□□□ -1.69
RFC1-202ENST00000381897 DAZ3Q9NR90 486 aaKnown RBP4.5□□□□□ -1.69
RFC1-202ENST00000381897 PCNX3Q9H6A9 2034 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 TRBV25-1A0A075B6N4 114 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 CD24P25063 80 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 FXYD2P54710 66 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 GVINP1Q7Z2Y8 2422 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 COL5A1P20908 1838 aaPredicted RBP4.5□□□□□ -1.69
RFC1-202ENST00000381897 M0R381 172 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 SH2D1AO60880 128 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 MRPS36P82909 103 aaKnown RBP4.5□□□□□ -1.69
RFC1-202ENST00000381897 ATXN8Q156A1 80 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 TMEM78Q5T7P6 136 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 Q6ZR03 302 aa4.5□□□□□ -1.69
RFC1-202ENST00000381897 LTBP2Q14767 1821 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 IGLV5-37A0A075B6J1 123 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 IGHV3-21A0A0B4J1V1 117 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 TMEM256-PLSCR3K7ERE1 68 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 CCL4P13236 92 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 SH2D6Q7Z4S9 175 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 VSIG2Q96IQ7 327 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 CCL19Q99731 98 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 CNOT1A5YKK6 2376 aaKnown RBP4.49□□□□□ -1.69
RFC1-202ENST00000381897 PRR31Q5SQ13 230 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 SOSTDC1Q6X4U4 206 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 TRPT1Q86TN4 253 aaKnown RBP4.49□□□□□ -1.69
RFC1-202ENST00000381897 LOC400499M0QZD8 3231 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 IGHV3-48P01763 117 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 IGHV1-2P23083 117 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 DIAPH2-AS1Q14236 149 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 DKK2Q9UBU2 259 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 ICOSQ9Y6W8 199 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 SVILO95425 2214 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 TRAV26-2A0A0B4J265 109 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 EXOC3-AS1Q8N2X6 119 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 TOMM6Q96B49 74 aa4.49□□□□□ -1.69
RFC1-202ENST00000381897 CEP250Q9BV73 2442 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 TRAV40A0A0B4J280 105 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 NCR2O95944 276 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 CECR9P0C854 216 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 DAZAP2Q15038 168 aaPredicted RBP4.48□□□□□ -1.69
RFC1-202ENST00000381897 FAM19A5Q7Z5A7 132 aaPredicted RBP4.48□□□□□ -1.69
RFC1-202ENST00000381897 SHANK2-AS3Q9BTD1 123 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 THADAQ6YHU6 1953 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 IGKV1D-17A0A075B6S4 117 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 A0A087WX48 190 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 Q6ZUT4 128 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 ZC2HC1AQ96GY0 325 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 K7EM74 188 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 NPYP01303 97 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 FAM53AQ6NSI3 398 aaPredicted RBP4.48□□□□□ -1.69
RFC1-202ENST00000381897 ZNF833PQ6ZTB9 187 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
RFC1-202ENST00000381897 TRBV19A0A075B6N1 114 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 MGPP08493 103 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 LCNL1Q6ZST4 164 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 TP73-AS1Q9UF72 201 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 Q9UF83 564 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 ACACAQ13085 2346 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 TMEM170BQ5T4T1 132 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 ZNF843Q8N446 348 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 CLEC2BQ92478 149 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 ZFHX4Q86UP3 3567 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 PINLYPA6NC86 204 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 F8VRH5 84 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 K7EMI3 77 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 SLC50A1Q9BRV3 221 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 MYO7BQ6PIF6 2116 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 LINC01619G3V211 115 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 J3QQQ9 107 aa4.47□□□□□ -1.69
RFC1-202ENST00000381897 SNRPD3P62318 126 aaKnown RBP4.47□□□□□ -1.69
RFC1-202ENST00000381897 ZNF503-AS2A6NEH8 195 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 H7C2G1 150 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 M0R2P5 195 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 Q8TCH9 128 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 URB1-AS1Q96HZ7 61 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 DOCK7Q96N67 2140 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 U3KQK5 164 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 FER1L5A0AVI2 2057 aa4.46□□□□□ -1.69
RFC1-202ENST00000381897 TRAV12-1A0A0B4J245 112 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 C17orf58Q2M2W7 97 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 FAM57AQ8TBR7 257 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 RNF5Q99942 180 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 MAP6D1Q9H9H5 199 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 MRPL35Q9NZE8 188 aaKnown RBP4.46□□□□□ -1.7
RFC1-202ENST00000381897 SRRM4A7MD48 611 aaKnown RBP4.46□□□□□ -1.7
RFC1-202ENST00000381897 H3BMM0 161 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 IGKV1-16P04430 117 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 APELAP0DMC3 54 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 ADORA2A-AS1P86434 159 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 ZNF876PQ49A33 203 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 PATE2Q6UY27 113 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 RNASE6Q93091 150 aaKnown RBP4.46□□□□□ -1.7
RFC1-202ENST00000381897 UBE2WQ96B02 151 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 PRAC1Q96KF2 57 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 PI4KAP42356 2102 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 IGKV1OR2-108A0A075B7D4 117 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 WIPF1O43516 503 aa4.46□□□□□ -1.7
RFC1-202ENST00000381897 TCL1BO95988 128 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms