RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 IGHV3-33P01772 117 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 RNASE3P12724 160 aaKnown RBP11.27□□□□□ -0.61
SMN2-201ENST00000380741 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.61
SMN2-201ENST00000380741 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 SMUG1Q53HV7 270 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 LELP1Q5T871 98 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 NTN5Q8WTR8 489 aaPredicted RBP11.27□□□□□ -0.61
SMN2-201ENST00000380741 EPDR1Q9UM22 224 aa11.27□□□□□ -0.61
SMN2-201ENST00000380741 FLG2Q5D862 2391 aaPredicted RBP11.27□□□□□ -0.61
SMN2-201ENST00000380741 Q8N814 137 aa11.26□□□□□ -0.61
SMN2-201ENST00000380741 PTH2Q96A98 100 aa11.26□□□□□ -0.61
SMN2-201ENST00000380741 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
SMN2-201ENST00000380741 GTSF1LQ9H1H1 148 aa11.26□□□□□ -0.61
SMN2-201ENST00000380741 SH3BGRL3Q9H299 93 aa11.26□□□□□ -0.61
SMN2-201ENST00000380741 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
SMN2-201ENST00000380741 CXorf1O96002 111 aa11.25□□□□□ -0.61
SMN2-201ENST00000380741 MBP02144 154 aa11.25□□□□□ -0.61
SMN2-201ENST00000380741 MGST1P10620 155 aaKnown RBP11.25□□□□□ -0.61
SMN2-201ENST00000380741 SERF2P84101 59 aa11.25□□□□□ -0.61
SMN2-201ENST00000380741 ATP6V0E2Q8NHE4 81 aa11.25□□□□□ -0.61
SMN2-201ENST00000380741 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
SMN2-201ENST00000380741 Q8N3U1 123 aa11.24□□□□□ -0.61
SMN2-201ENST00000380741 ACTR3CQ9C0K3 210 aaPredicted RBP11.24□□□□□ -0.61
SMN2-201ENST00000380741 IGKV3D-20A0A0C4DH25 116 aa11.23□□□□□ -0.61
SMN2-201ENST00000380741 LAGE3Q14657 143 aa11.23□□□□□ -0.61
SMN2-201ENST00000380741 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
SMN2-201ENST00000380741 Q6ZSN1 163 aa11.23□□□□□ -0.61
SMN2-201ENST00000380741 LINC00479Q96M42 142 aa11.23□□□□□ -0.61
SMN2-201ENST00000380741 PARLQ9H300 379 aa11.23□□□□□ -0.61
SMN2-201ENST00000380741 TNFSF18Q9UNG2 199 aa11.23□□□□□ -0.61
SMN2-201ENST00000380741 TRAV34A0A0B4J273 112 aa11.22□□□□□ -0.61
SMN2-201ENST00000380741 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
SMN2-201ENST00000380741 Q5BKY6 102 aa11.22□□□□□ -0.61
SMN2-201ENST00000380741 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
SMN2-201ENST00000380741 GAGE12JA6NER3 117 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 A8MWV9 139 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 LINC00694P0DN24 101 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 S100A4P26447 101 aaKnown RBP11.21□□□□□ -0.61
SMN2-201ENST00000380741 GAGE1Q13065 139 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 GAGE4Q13068 117 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 GAGE5Q13069 117 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 GAGE13Q4V321 117 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 ZFP2Q6ZN57 461 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 MED28Q9H204 178 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 FAM30AQ9NZY2 134 aa11.21□□□□□ -0.61
SMN2-201ENST00000380741 WFDC2Q14508 124 aa11.2□□□□□ -0.62
SMN2-201ENST00000380741 ZNF726P1Q15940 193 aa11.2□□□□□ -0.62
SMN2-201ENST00000380741 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
SMN2-201ENST00000380741 PIK3CD-AS1Q5SR53 167 aa11.2□□□□□ -0.62
SMN2-201ENST00000380741 TM2D2Q9BX73 214 aa11.2□□□□□ -0.62
SMN2-201ENST00000380741 JPT2Q9H910 190 aa11.2□□□□□ -0.62
SMN2-201ENST00000380741 Q9UF83 564 aa11.2□□□□□ -0.62
SMN2-201ENST00000380741 ASIPP42127 132 aa11.19□□□□□ -0.62
SMN2-201ENST00000380741 UBE2G2P60604 165 aa11.19□□□□□ -0.62
SMN2-201ENST00000380741 RPL7L1Q6DKI1 246 aaKnown RBP11.19□□□□□ -0.62
SMN2-201ENST00000380741 UFSP1Q6NVU6 142 aa11.19□□□□□ -0.62
SMN2-201ENST00000380741 Q86TA4 180 aa11.19□□□□□ -0.62
SMN2-201ENST00000380741 OR2T35Q8NGX2 323 aa11.19□□□□□ -0.62
SMN2-201ENST00000380741 SAMD10Q9BYL1 202 aa11.19□□□□□ -0.62
SMN2-201ENST00000380741 CTXND1A0A1B0GTU2 59 aa11.18□□□□□ -0.62
SMN2-201ENST00000380741 RNF222A6NCQ9 220 aa11.18□□□□□ -0.62
SMN2-201ENST00000380741 FABP5P3A8MUU1 101 aa11.18□□□□□ -0.62
SMN2-201ENST00000380741 H3BVH4 76 aa11.18□□□□□ -0.62
SMN2-201ENST00000380741 PTTG1O95997 202 aa11.18□□□□□ -0.62
SMN2-201ENST00000380741 IFNA7P01567 189 aa11.18□□□□□ -0.62
SMN2-201ENST00000380741 DAZ4Q86SG3 579 aaKnown RBP11.18□□□□□ -0.62
SMN2-201ENST00000380741 C14orf178Q8N769 122 aaPredicted RBP11.18□□□□□ -0.62
SMN2-201ENST00000380741 INO80EQ8NBZ0 244 aaPredicted RBP11.18□□□□□ -0.62
SMN2-201ENST00000380741 DAZ3Q9NR90 486 aaKnown RBP11.18□□□□□ -0.62
SMN2-201ENST00000380741 IL36BQ9NZH7 164 aa11.18□□□□□ -0.62
SMN2-201ENST00000380741 B4DEV8 164 aa11.17□□□□□ -0.62
SMN2-201ENST00000380741 PEX7O00628 323 aa11.17□□□□□ -0.62
SMN2-201ENST00000380741 GIPP09681 153 aaPredicted RBP11.17□□□□□ -0.62
SMN2-201ENST00000380741 TRAV8-3A0A0A6YYJ7 113 aa11.16□□□□□ -0.62
SMN2-201ENST00000380741 LECT2O14960 151 aa11.16□□□□□ -0.62
SMN2-201ENST00000380741 C1QBP02746 253 aa11.16□□□□□ -0.62
SMN2-201ENST00000380741 CRIP1P50238 77 aa11.16□□□□□ -0.62
SMN2-201ENST00000380741 ZC2HC1AQ96GY0 325 aa11.16□□□□□ -0.62
SMN2-201ENST00000380741 FXYD6-FXYD2A0A087WZ82 144 aa11.15□□□□□ -0.62
SMN2-201ENST00000380741 BORCS7-ASMTA0A0B4J1R7 106 aa11.15□□□□□ -0.62
SMN2-201ENST00000380741 FAM74A7A6NL05 159 aa11.15□□□□□ -0.62
SMN2-201ENST00000380741 KRBOX1C9JBD0 128 aa11.15□□□□□ -0.62
SMN2-201ENST00000380741 M0R036 132 aa11.15□□□□□ -0.62
SMN2-201ENST00000380741 FGF8P55075 233 aaPredicted RBP11.15□□□□□ -0.62
SMN2-201ENST00000380741 HIST1H2BAQ96A08 127 aa11.15□□□□□ -0.62
SMN2-201ENST00000380741 A0A087WWC5 75 aa11.14□□□□□ -0.63
SMN2-201ENST00000380741 RHODO00212 210 aa11.14□□□□□ -0.63
SMN2-201ENST00000380741 ARMS2P0C7Q2 107 aa11.14□□□□□ -0.63
SMN2-201ENST00000380741 TOR2AQ5JU69 321 aa11.14□□□□□ -0.63
SMN2-201ENST00000380741 DNLZQ5SXM8 178 aa11.14□□□□□ -0.63
SMN2-201ENST00000380741 FAM74A4Q5TZK3 123 aa11.14□□□□□ -0.63
SMN2-201ENST00000380741 NKX6-2Q9C056 277 aaPredicted RBP11.14□□□□□ -0.63
SMN2-201ENST00000380741 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.13□□□□□ -0.63
SMN2-201ENST00000380741 GRIFINA4D1Z8 144 aa11.13□□□□□ -0.63
SMN2-201ENST00000380741 SH2D1AO60880 128 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms