RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 A0A0U1RRA0 63 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 PSCAO43653 123 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 VCYO14598 125 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 RBAKDNA6NC62 111 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 LINC01548A6NM66 108 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 SPXQ9BT56 116 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 ERG28Q9UKR5 140 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 NBASA2RRP1 2371 aa8.76□□□□□ -1.01
SMAD9-202ENST00000379826 IGLC6P0CF74 106 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 IGKV3OR2-268A0A0C4DH90 116 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 MAPKAPK5-AS1Q8N8E1 139 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 Q8N9W7 124 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 ZGRF1Q86YA3 2104 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 ZNF876PQ49A33 203 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 Q8NA96 180 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 WFDC11Q8NEX6 87 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 CELSR3Q9NYQ7 3312 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 C9JAW5 83 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 NAV3Q8IVL0 2385 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 TAL2Q16559 108 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 MRGPRG-AS1Q2M3A8 158 aa8.75□□□□□ -1.01
SMAD9-202ENST00000379826 IGF1P05019 195 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 Q6ZQT7 251 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 DUSP14O95147 198 aaKnown RBP8.74□□□□□ -1.01
SMAD9-202ENST00000379826 PLCE1Q9P212 2302 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 LY6LH3BQJ8 138 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 SHISA2Q6UWI4 295 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 LRRC75A-AS1Q8N1F1 130 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 FGF6P10767 208 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 PMVKQ15126 192 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 HIGD1BQ9P298 99 aa8.74□□□□□ -1.01
SMAD9-202ENST00000379826 SPTBN1Q01082 2364 aaKnown RBP8.73□□□□□ -1.01
SMAD9-202ENST00000379826 TRAV8-4A0A0B4J246 113 aa8.73□□□□□ -1.01
SMAD9-202ENST00000379826 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
SMAD9-202ENST00000379826 RNASE13Q5GAN3 156 aaKnown RBP8.73□□□□□ -1.01
SMAD9-202ENST00000379826 MEIG1Q5JSS6 88 aa8.73□□□□□ -1.01
SMAD9-202ENST00000379826 BAALCQ8WXS3 180 aa8.73□□□□□ -1.01
SMAD9-202ENST00000379826 ATP6V0BQ99437 205 aa8.73□□□□□ -1.01
SMAD9-202ENST00000379826 ADARB2-AS1A8MUL3 147 aa8.73□□□□□ -1.01
SMAD9-202ENST00000379826 CMC4P56277 68 aaPredicted RBP8.73□□□□□ -1.01
SMAD9-202ENST00000379826 RPL39P62891 51 aaKnown RBP8.73□□□□□ -1.01
SMAD9-202ENST00000379826 IL17DQ8TAD2 202 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 TRBV12-3P01733 135 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 SPINK13Q1W4C9 94 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 IGHV4-30-2A0A087WSY4 118 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 KNCNA6PVL3 124 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 CCDC140Q96MF4 163 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 DAZ1Q9NQZ3 744 aaKnown RBP8.72□□□□□ -1.01
SMAD9-202ENST00000379826 A0A096LNJ9 63 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 LINC01587Q99440 93 aa8.72□□□□□ -1.01
SMAD9-202ENST00000379826 LGALS1P09382 135 aaKnown RBP8.72□□□□□ -1.01
SMAD9-202ENST00000379826 TOMM6Q96B49 74 aa8.71□□□□□ -1.01
SMAD9-202ENST00000379826 C20orf78Q9BR46 151 aa8.71□□□□□ -1.01
SMAD9-202ENST00000379826 ZFAND6Q6FIF0 208 aa8.71□□□□□ -1.02
SMAD9-202ENST00000379826 TNFRSF13BO14836 293 aaPredicted RBP8.71□□□□□ -1.02
SMAD9-202ENST00000379826 ODF3BA8MYP8 253 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 UBE2L6O14933 153 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 TSPAN13O95857 204 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 SUMO4Q6EEV6 95 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 PHLDA1Q8WV24 401 aaPredicted RBP8.7□□□□□ -1.02
SMAD9-202ENST00000379826 JPT2Q9H910 190 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 C11orf21Q9P2W6 132 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
SMAD9-202ENST00000379826 UNQ9165/PRO28630Q6UXU0 137 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 PLEKHB2Q96CS7 222 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 C20orf173Q96LM9 149 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 CENPVL3A0A0U1RRI6 287 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 NDUFA4O00483 81 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 PTH2Q96A98 100 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 TMEM141Q96I45 108 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 RPL35AP18077 110 aaKnown RBP8.7□□□□□ -1.02
SMAD9-202ENST00000379826 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
SMAD9-202ENST00000379826 C1QTNF4Q9BXJ3 329 aa8.7□□□□□ -1.02
SMAD9-202ENST00000379826 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 TMEM95Q3KNT9 176 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 C9orf47Q6ZRZ4 202 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 GATD1Q8NB37 220 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 USMG5Q96IX5 58 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 IGHV1-69DA0A0B4J2H0 117 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 IGHV1-69P01742 117 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 SRSF2Q01130 221 aaKnown RBP8.69□□□□□ -1.02
SMAD9-202ENST00000379826 ZNF48Q96MX3 618 aaPredicted RBP8.69□□□□□ -1.02
SMAD9-202ENST00000379826 SPAG8Q99932 426 aaPredicted RBP8.69□□□□□ -1.02
SMAD9-202ENST00000379826 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 ACACBO00763 2458 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 J3QQQ9 107 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 M0R2P5 195 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 SYNJ2BPP57105 145 aa8.69□□□□□ -1.02
SMAD9-202ENST00000379826 C16orf54Q6UWD8 224 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 PIP4P2Q8N4L2 257 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 PPDPFLQ8WWR9 84 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 RASL10AQ92737 203 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 LY6G5BQ8NDX9 201 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 MRPL53Q96EL3 112 aaKnown RBP8.68□□□□□ -1.02
SMAD9-202ENST00000379826 TRAV12-1A0A0B4J245 112 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 OPRPNQ99935 248 aaPredicted RBP8.68□□□□□ -1.02
SMAD9-202ENST00000379826 SPANXB1Q9NS25 103 aaPredicted RBP8.68□□□□□ -1.02
SMAD9-202ENST00000379826 PRO1854Q9UHT4 67 aa8.68□□□□□ -1.02
SMAD9-202ENST00000379826 TRGV11A0A075B6L2 103 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms