RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 APRG1Q8IVJ8 170 aa14.7□□□□□ -0.06
SHROOM1-202ENST00000378676 CHAC1Q9BUX1 264 aa14.7□□□□□ -0.06
SHROOM1-202ENST00000378676 PHLDA3Q9Y5J5 127 aa14.7□□□□□ -0.06
SHROOM1-202ENST00000378676 ZFYVE26Q68DK2 2539 aa14.7□□□□□ -0.06
SHROOM1-202ENST00000378676 A0A087WX48 190 aa14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 A0A0G2JLM5 398 aa14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 UTP20O75691 2785 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 SCGB1A1P11684 91 aa14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 RNASE3P12724 160 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 MGPP08493 103 aa14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 FXYD2P54710 66 aa14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 BBC3Q96PG8 261 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 HIGD1BQ9P298 99 aa14.69□□□□□ -0.06
SHROOM1-202ENST00000378676 SUMO2P61956 95 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 PSMG4Q5JS54 123 aa14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 DAZ1Q9NQZ3 744 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 TRBV25-1A0A075B6N4 114 aa14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 PRB1P04280 392 aa14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 GCSHP23434 173 aa14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 SAMD13Q5VXD3 122 aa14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 USP9XQ93008 2570 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-202ENST00000378676 CSPG4Q6UVK1 2322 aa14.67□□□□□ -0.06
SHROOM1-202ENST00000378676 MAPKAPK5-AS1Q8N8E1 139 aa14.67□□□□□ -0.06
SHROOM1-202ENST00000378676 MED14OSP0DP75 135 aa14.67□□□□□ -0.06
SHROOM1-202ENST00000378676 DOPEY1Q5JWR5 2465 aa14.66□□□□□ -0.06
SHROOM1-202ENST00000378676 EPG5Q9HCE0 2579 aa14.66□□□□□ -0.06
SHROOM1-202ENST00000378676 A0A1W2PPM0 123 aa14.66□□□□□ -0.06
SHROOM1-202ENST00000378676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-202ENST00000378676 NRGNQ92686 78 aa14.66□□□□□ -0.06
SHROOM1-202ENST00000378676 CRYBG3Q68DQ2 2970 aa14.65□□□□□ -0.06
SHROOM1-202ENST00000378676 HLA-DRB4P13762 266 aa14.65□□□□□ -0.06
SHROOM1-202ENST00000378676 HLA-DRB4X5D2U9 266 aa14.65□□□□□ -0.06
SHROOM1-202ENST00000378676 AGRNO00468 2067 aa14.65□□□□□ -0.06
SHROOM1-202ENST00000378676 ORMDL2Q53FV1 153 aa14.65□□□□□ -0.07
SHROOM1-202ENST00000378676 C10orf99Q6UWK7 81 aa14.65□□□□□ -0.07
SHROOM1-202ENST00000378676 WFDC12Q8WWY7 111 aa14.65□□□□□ -0.07
SHROOM1-202ENST00000378676 TOMM6Q96B49 74 aa14.65□□□□□ -0.07
SHROOM1-202ENST00000378676 C20orf78Q9BR46 151 aa14.65□□□□□ -0.07
SHROOM1-202ENST00000378676 SPCS1Q9Y6A9 102 aa14.65□□□□□ -0.07
SHROOM1-202ENST00000378676 ZNF843Q8N446 348 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 SCGB3A1Q96QR1 104 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 TRAV12-1A0A0B4J245 112 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 TRBV7-9A0A0J9YWB2 115 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 KLLNB2CW77 178 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 F8VRH5 84 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 K7ERJ3 54 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 PLNP26678 52 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 DCANP1Q8TF63 244 aa14.63□□□□□ -0.07
SHROOM1-202ENST00000378676 K7EMI3 77 aa14.62□□□□□ -0.07
SHROOM1-202ENST00000378676 NXPH4O95158 308 aa14.62□□□□□ -0.07
SHROOM1-202ENST00000378676 H7C1H1 209 aa14.62□□□□□ -0.07
SHROOM1-202ENST00000378676 IGHV4-59P01825 116 aa14.62□□□□□ -0.07
SHROOM1-202ENST00000378676 SLC25A16P16260 332 aa14.62□□□□□ -0.07
SHROOM1-202ENST00000378676 KIF25-AS1Q9Y6Z4 181 aa14.62□□□□□ -0.07
SHROOM1-202ENST00000378676 B4DSR2 109 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 FABP2P12104 132 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 NEXN-AS1Q8NBZ9 246 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 JPT2Q9H910 190 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 MYO18BQ8IUG5 2567 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 K7EMT4 169 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 SMIM13P0DJ93 91 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 PSMB8P28062 276 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 LINC00315P59091 139 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 C2orf66Q6UXQ4 117 aa14.61□□□□□ -0.07
SHROOM1-202ENST00000378676 DEFB112Q30KQ8 113 aa14.6□□□□□ -0.07
SHROOM1-202ENST00000378676 ZNF462Q96JM2 2506 aa14.6□□□□□ -0.07
SHROOM1-202ENST00000378676 CEND1Q8N111 149 aa14.6□□□□□ -0.07
SHROOM1-202ENST00000378676 POM121L12Q8N7R1 296 aa14.6□□□□□ -0.07
SHROOM1-202ENST00000378676 PHLDA1Q8WV24 401 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-202ENST00000378676 BAALCQ8WXS3 180 aa14.6□□□□□ -0.07
SHROOM1-202ENST00000378676 TM2D2Q9BX73 214 aa14.59□□□□□ -0.07
SHROOM1-202ENST00000378676 TRAV12-3A0A0B4J271 114 aa14.58□□□□□ -0.08
SHROOM1-202ENST00000378676 DEFB104AQ8WTQ1 72 aa14.58□□□□□ -0.08
SHROOM1-202ENST00000378676 NHP2Q9NX24 153 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-202ENST00000378676 CSMD2Q7Z408 3487 aa14.58□□□□□ -0.08
SHROOM1-202ENST00000378676 ID1P41134 155 aa14.58□□□□□ -0.08
SHROOM1-202ENST00000378676 FAM159AQ6UWV7 190 aa14.58□□□□□ -0.08
SHROOM1-202ENST00000378676 SIGMAR1Q99720 223 aa14.58□□□□□ -0.08
SHROOM1-202ENST00000378676 ZNF688P0C7X2 276 aa14.57□□□□□ -0.08
SHROOM1-202ENST00000378676 SAMD5Q5TGI4 173 aa14.57□□□□□ -0.08
SHROOM1-202ENST00000378676 ANKRD17O75179 2603 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-202ENST00000378676 ZNF580Q9UK33 172 aa14.56□□□□□ -0.08
SHROOM1-202ENST00000378676 A0A087WWL8 130 aa14.56□□□□□ -0.08
SHROOM1-202ENST00000378676 CD7P09564 240 aa14.56□□□□□ -0.08
SHROOM1-202ENST00000378676 AZU1P20160 251 aa14.56□□□□□ -0.08
SHROOM1-202ENST00000378676 SUMO4Q6EEV6 95 aa14.56□□□□□ -0.08
SHROOM1-202ENST00000378676 ZANQ9Y493 2812 aa14.56□□□□□ -0.08
SHROOM1-202ENST00000378676 DUSP14O95147 198 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-202ENST00000378676 DOPEY2Q9Y3R5 2298 aa14.55□□□□□ -0.08
SHROOM1-202ENST00000378676 TEX48A0A1B0GUV7 120 aa14.55□□□□□ -0.08
SHROOM1-202ENST00000378676 A0A1B0GV72 72 aa14.55□□□□□ -0.08
SHROOM1-202ENST00000378676 IGKV3-20P01619 116 aa14.55□□□□□ -0.08
SHROOM1-202ENST00000378676 RPL24P83731 157 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-202ENST00000378676 PRSS29PA6NIE9 313 aa14.54□□□□□ -0.08
SHROOM1-202ENST00000378676 TRAV12-2A0A075B6T6 113 aa14.54□□□□□ -0.08
SHROOM1-202ENST00000378676 MAPK1IP1LQ8NDC0 245 aa14.54□□□□□ -0.08
SHROOM1-202ENST00000378676 TMEM238LA0A1B0GVL6 79 aa14.53□□□□□ -0.08
SHROOM1-202ENST00000378676 OR11H12B2RN74 326 aa14.53□□□□□ -0.08
SHROOM1-202ENST00000378676 PPP1R17O96001 155 aa14.53□□□□□ -0.08
SHROOM1-202ENST00000378676 OR11H1Q8NG94 326 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms