RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 HOXA5P20719 270 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 ZNF575Q86XF7 245 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 DYNC2H1Q8NCM8 4307 aaKnown RBP9.3□□□□□ -0.92
CKAP2-202ENST00000378034 TMSB15BA0A087X1C1 80 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 GRIFINA4D1Z8 144 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 ARMS2P0C7Q2 107 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 CEBPGP53567 150 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 RPS20P60866 119 aaKnown RBP9.3□□□□□ -0.92
CKAP2-202ENST00000378034 LGALS9CQ6DKI2 356 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 OCC1Q8TAD7 63 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 SCRT2Q9NQ03 307 aa9.3□□□□□ -0.92
CKAP2-202ENST00000378034 PGPEP1LA6NFU8 196 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 H3BVH4 76 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 FAM74A3Q4VXF1 159 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 SYT8Q8NBV8 401 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 OR4C5Q8NGB2 326 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 LINC00476Q8WZB0 136 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 SMIM7Q9BQ49 75 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 MUC4Q99102 2169 aa9.29□□□□□ -0.92
CKAP2-202ENST00000378034 P01737 135 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 PHLDA3Q9Y5J5 127 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 TRAV26-1A0A087WT03 109 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 XKRY2A2RUG3 117 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 ZNF727A8MUV8 499 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 RS1O15537 224 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 RPL19P84098 196 aaKnown RBP9.28□□□□□ -0.92
CKAP2-202ENST00000378034 FHL2Q14192 279 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 POM121L12Q8N7R1 296 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 PRO0255Q9UI72 69 aa9.28□□□□□ -0.92
CKAP2-202ENST00000378034 TRGV4A0A0C4DH28 118 aa9.27□□□□□ -0.93
CKAP2-202ENST00000378034 A8MWV9 139 aa9.27□□□□□ -0.93
CKAP2-202ENST00000378034 OR2D3Q8NGH3 330 aa9.27□□□□□ -0.93
CKAP2-202ENST00000378034 ZNF479Q96JC4 524 aa9.27□□□□□ -0.93
CKAP2-202ENST00000378034 SSBP4Q9BWG4 385 aaPredicted RBP9.27□□□□□ -0.93
CKAP2-202ENST00000378034 K7EN84 100 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 SNAI2O43623 268 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 OR5AL1P0C617 328 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 P0DMU3 169 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 FAM231AP0DMU4 169 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 FAM231CP0DMU5 169 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 CFAP126Q5VTH2 177 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 ZFP82Q8N141 532 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 LY6G6CO95867 125 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 SFTA3P0C7M3 94 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 SRSF3P84103 164 aaKnown RBP9.26□□□□□ -0.93
CKAP2-202ENST00000378034 FAM231DQ6ZW35 169 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 NUDT10Q8NFP7 164 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 NUDT11Q96G61 164 aa9.26□□□□□ -0.93
CKAP2-202ENST00000378034 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
CKAP2-202ENST00000378034 C9JQL5 133 aa9.25□□□□□ -0.93
CKAP2-202ENST00000378034 PAX4O43316 350 aa9.25□□□□□ -0.93
CKAP2-202ENST00000378034 CRYBA4P53673 196 aa9.25□□□□□ -0.93
CKAP2-202ENST00000378034 DMRTA1Q5VZB9 504 aa9.25□□□□□ -0.93
CKAP2-202ENST00000378034 ZFP2Q6ZN57 461 aa9.25□□□□□ -0.93
CKAP2-202ENST00000378034 LINC01551Q86U37 167 aa9.25□□□□□ -0.93
CKAP2-202ENST00000378034 VSIG2Q96IQ7 327 aa9.25□□□□□ -0.93
CKAP2-202ENST00000378034 A0A0J9YY99 117 aa9.24□□□□□ -0.93
CKAP2-202ENST00000378034 NXPH4O95158 308 aa9.24□□□□□ -0.93
CKAP2-202ENST00000378034 NUDT3O95989 172 aa9.24□□□□□ -0.93
CKAP2-202ENST00000378034 TMEM241Q24JQ0 296 aa9.24□□□□□ -0.93
CKAP2-202ENST00000378034 RPP21Q9H633 154 aaKnown RBP9.24□□□□□ -0.93
CKAP2-202ENST00000378034 IGLC6P0CF74 106 aa9.24□□□□□ -0.93
CKAP2-202ENST00000378034 RNF212Q495C1 297 aa9.24□□□□□ -0.93
CKAP2-202ENST00000378034 SFRP2Q96HF1 295 aa9.24□□□□□ -0.93
CKAP2-202ENST00000378034 RNASE7Q9H1E1 156 aaKnown RBP9.24□□□□□ -0.93
CKAP2-202ENST00000378034 LYSTQ99698 3801 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 A0A1W2PPQ1 181 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 F2Z2F3 143 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 M0R381 172 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 RHODO00212 210 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 GATA1P15976 413 aaPredicted RBP9.23□□□□□ -0.93
CKAP2-202ENST00000378034 SOHLH1Q5JUK2 328 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 FER1L6-AS1Q8NA97 138 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 NAT8Q9UHE5 227 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 NACAE9PAV3 2078 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 ERVFC1-1P60608 527 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
CKAP2-202ENST00000378034 TRBV6-4A0A1B0GX49 114 aa9.22□□□□□ -0.93
CKAP2-202ENST00000378034 GATCO43716 136 aaKnown RBP9.22□□□□□ -0.93
CKAP2-202ENST00000378034 FAM3BP58499 235 aaPredicted RBP9.22□□□□□ -0.93
CKAP2-202ENST00000378034 CT83Q5H943 113 aa9.22□□□□□ -0.93
CKAP2-202ENST00000378034 OR10AG1Q8NH19 301 aa9.22□□□□□ -0.93
CKAP2-202ENST00000378034 OSTCQ9NRP0 149 aa9.22□□□□□ -0.93
CKAP2-202ENST00000378034 KMT2CQ8NEZ4 4911 aaKnown RBP9.22□□□□□ -0.93
CKAP2-202ENST00000378034 GZMBP10144 247 aa9.21□□□□□ -0.93
CKAP2-202ENST00000378034 CCL18P55774 89 aa9.21□□□□□ -0.93
CKAP2-202ENST00000378034 CACNG7P62955 275 aa9.21□□□□□ -0.93
CKAP2-202ENST00000378034 MRPL23Q16540 153 aaKnown RBP9.21□□□□□ -0.93
CKAP2-202ENST00000378034 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.93
CKAP2-202ENST00000378034 UFSP1Q6NVU6 142 aa9.21□□□□□ -0.93
CKAP2-202ENST00000378034 WDR73Q6P4I2 378 aa9.21□□□□□ -0.93
CKAP2-202ENST00000378034 A0A096LPF7 62 aa9.21□□□□□ -0.94
CKAP2-202ENST00000378034 A8MWL6 223 aa9.21□□□□□ -0.94
CKAP2-202ENST00000378034 RPL23P62829 140 aaKnown RBP9.21□□□□□ -0.94
CKAP2-202ENST00000378034 UBE2DNLQ8IWF7 75 aa9.21□□□□□ -0.94
CKAP2-202ENST00000378034 JPT2Q9H910 190 aa9.21□□□□□ -0.94
CKAP2-202ENST00000378034 RHOHQ15669 191 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms