RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
RTN3-206ENST00000377819 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
RTN3-206ENST00000377819 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 Q6ZS92 163 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 NPBQ8NG41 125 aa8.44□□□□□ -1.06
RTN3-206ENST00000377819 TRBV6-6A0A0A6YYG2 114 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 WISP3O95389 354 aaPredicted RBP8.43□□□□□ -1.06
RTN3-206ENST00000377819 RNF152Q8N8N0 203 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 REG4Q9BYZ8 158 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 FHL1Q13642 323 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 LENEPQ9Y5L5 61 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 LINC00114Q6XXX2 140 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 IGHV2-70DA0A0C4DH43 119 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 DUX4L9Q6RFH8 374 aaPredicted RBP8.43□□□□□ -1.06
RTN3-206ENST00000377819 RNF138Q8WVD3 245 aa8.43□□□□□ -1.06
RTN3-206ENST00000377819 LECT2O14960 151 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 A0A096LNI7 61 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 E7EQL1 145 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 C16orf74Q96GX8 76 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 V9GYY9 64 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 IGKV1D-17A0A075B6S4 117 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 TMEM256-PLSCR3K7ERE1 68 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 DAZ2Q13117 558 aaKnown RBP8.42□□□□□ -1.06
RTN3-206ENST00000377819 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
RTN3-206ENST00000377819 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
RTN3-206ENST00000377819 FAM231DQ6ZW35 169 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 Q8N9L7 120 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 PATJQ8NI35 1801 aa8.42□□□□□ -1.06
RTN3-206ENST00000377819 IGKV1-27A0A075B6S5 117 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 H3BUA1 57 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 TEX36Q5VZQ5 186 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 IGLV3-19P01714 112 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 WIPF2Q8TF74 440 aaPredicted RBP8.41□□□□□ -1.06
RTN3-206ENST00000377819 GTSF1Q8WW33 167 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 IGLC7A0M8Q6 106 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 IGLL1P15814 213 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 TEN1Q86WV5 123 aa8.41□□□□□ -1.06
RTN3-206ENST00000377819 CD59P13987 128 aa8.4□□□□□ -1.06
RTN3-206ENST00000377819 KLK12Q9UKR0 248 aa8.4□□□□□ -1.06
RTN3-206ENST00000377819 LOC105371267A0A1B0GV96 52 aa8.4□□□□□ -1.06
RTN3-206ENST00000377819 PINLYPA6NC86 204 aa8.4□□□□□ -1.06
RTN3-206ENST00000377819 FNDC1Q4ZHG4 1894 aaPredicted RBP8.4□□□□□ -1.06
RTN3-206ENST00000377819 MYO9AB2RTY4 2548 aa8.4□□□□□ -1.06
RTN3-206ENST00000377819 ZFC3H1O60293 1989 aaKnown RBP8.4□□□□□ -1.06
RTN3-206ENST00000377819 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.07
RTN3-206ENST00000377819 CRYGBP07316 175 aa8.4□□□□□ -1.07
RTN3-206ENST00000377819 CTSGP08311 255 aa8.4□□□□□ -1.07
RTN3-206ENST00000377819 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.07
RTN3-206ENST00000377819 K7EM74 188 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 VOPP1Q96AW1 172 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 UBE2D4Q9Y2X8 147 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 TSC2P49815 1807 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 HTTP42858 3142 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 DOCK8Q8NF50 2099 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 K7ERJ3 54 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 NDUFS7O75251 213 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 COX7BP24311 80 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 VPREB3Q9UKI3 123 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 CASP8AP2Q9UKL3 1982 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 TLN2Q9Y4G6 2542 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 SCN5AQ14524 2016 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 A0A087WZ39 114 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 ESM1Q9NQ30 184 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 TMEM61Q8N0U2 210 aa8.39□□□□□ -1.07
RTN3-206ENST00000377819 POLR3KQ9Y2Y1 108 aaPredicted RBP8.39□□□□□ -1.07
RTN3-206ENST00000377819 PLXNB1O43157 2135 aa8.38□□□□□ -1.07
RTN3-206ENST00000377819 CCL25O15444 150 aa8.38□□□□□ -1.07
RTN3-206ENST00000377819 C7orf33Q8WU49 177 aa8.38□□□□□ -1.07
RTN3-206ENST00000377819 NDUFA4L2Q9NRX3 87 aa8.38□□□□□ -1.07
RTN3-206ENST00000377819 WDR86Q86TI4 376 aa8.38□□□□□ -1.07
RTN3-206ENST00000377819 SERP2Q8N6R1 65 aa8.38□□□□□ -1.07
RTN3-206ENST00000377819 A0A0J9YXV3 536 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 A4D1N5 150 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 H3BRN7 92 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 K7EQD1 137 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 GATA1P15976 413 aaPredicted RBP8.37□□□□□ -1.07
RTN3-206ENST00000377819 Q6P435 159 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 EPOPA6NHQ4 379 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 NPSP0C0P6 89 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 LOXP28300 417 aaPredicted RBP8.37□□□□□ -1.07
RTN3-206ENST00000377819 CYTL1Q9NRR1 136 aa8.37□□□□□ -1.07
RTN3-206ENST00000377819 COL4A6Q14031 1691 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 IGKV2D-26A0A0A0MRZ7 120 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 Q6ZS49 121 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 Q8N9W7 124 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 DKK2Q9UBU2 259 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 HHLA3Q9XRX5 114 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 A6NED7 52 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 NCR3O14931 201 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 Q0VFX4 171 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 Q8N1Y9 231 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 PRYO14603 147 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 GNRH2O43555 120 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 WISP1O95388 367 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 LINC00205P59089 165 aa8.36□□□□□ -1.07
RTN3-206ENST00000377819 TEX49A0A1B0GTD5 131 aa8.35□□□□□ -1.07
RTN3-206ENST00000377819 H3BT86 120 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms