RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 LGALS9CQ6DKI2 356 aa13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 PTPN13Q12923 2485 aa13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 ANGP03950 147 aaKnown RBP13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 IGLL1P15814 213 aa13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 ZNF625Q96I27 306 aaPredicted RBP13.87□□□□□ -0.19
CLSTN1-202ENST00000377298 SONP18583 2426 aaKnown RBP13.86□□□□□ -0.19
CLSTN1-202ENST00000377298 K7EMI3 77 aa13.86□□□□□ -0.19
CLSTN1-202ENST00000377298 TEX48A0A1B0GUV7 120 aa13.86□□□□□ -0.19
CLSTN1-202ENST00000377298 VWC2LB2RUY7 222 aa13.86□□□□□ -0.19
CLSTN1-202ENST00000377298 ZNF48Q96MX3 618 aaPredicted RBP13.86□□□□□ -0.19
CLSTN1-202ENST00000377298 CSPG4Q6UVK1 2322 aa13.86□□□□□ -0.19
CLSTN1-202ENST00000377298 MORN5Q5VZ52 161 aa13.86□□□□□ -0.19
CLSTN1-202ENST00000377298 A0A0J9YY99 117 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 ODF3BA8MYP8 253 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 ASPHD1Q5U4P2 390 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 OCIAD2Q56VL3 154 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 C22orf34Q6ZV56 151 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 C4orf3Q8WVX3 66 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 C16orf74Q96GX8 76 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 F8VRH5 84 aa13.85□□□□□ -0.19
CLSTN1-202ENST00000377298 HERVK_113P63121 156 aa13.84□□□□□ -0.19
CLSTN1-202ENST00000377298 KLF5Q13887 457 aaPredicted RBP13.84□□□□□ -0.19
CLSTN1-202ENST00000377298 FAM167A-AS1Q96KT0 104 aa13.84□□□□□ -0.19
CLSTN1-202ENST00000377298 NCOA6Q14686 2063 aaPredicted RBP13.84□□□□□ -0.19
CLSTN1-202ENST00000377298 E7EUB6 86 aa13.84□□□□□ -0.19
CLSTN1-202ENST00000377298 TRAV8-4A0A0B4J246 113 aa13.83□□□□□ -0.2
CLSTN1-202ENST00000377298 ANAPC13Q9BS18 74 aa13.83□□□□□ -0.2
CLSTN1-202ENST00000377298 MUC22E2RYF6 1773 aaPredicted RBP13.82□□□□□ -0.2
CLSTN1-202ENST00000377298 PFN2P35080 140 aa13.82□□□□□ -0.2
CLSTN1-202ENST00000377298 MRPL35Q9NZE8 188 aaKnown RBP13.82□□□□□ -0.2
CLSTN1-202ENST00000377298 FANCD2OSQ96PS1 177 aa13.82□□□□□ -0.2
CLSTN1-202ENST00000377298 NDUFA12Q9UI09 145 aa13.82□□□□□ -0.2
CLSTN1-202ENST00000377298 IGKV1OR2-108A0A075B7D4 117 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 GTSF1LQ9H1H1 148 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 IGKV2D-24A0A075B6R9 120 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 KIR2DL5BA0A0G2JN68 375 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 KIR2DL5BA0A0G2JPC4 375 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 SPART-AS1P0CW21 52 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 KIR2DL5AQ8N109 375 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 MYO18BQ8IUG5 2567 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 EP400Q96L91 3159 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 NCOR2Q9Y618 2525 aa13.81□□□□□ -0.2
CLSTN1-202ENST00000377298 C9orf47Q6ZRZ4 202 aa13.8□□□□□ -0.2
CLSTN1-202ENST00000377298 DNAJC30Q96LL9 226 aa13.8□□□□□ -0.2
CLSTN1-202ENST00000377298 KLF12Q9Y4X4 402 aa13.8□□□□□ -0.2
CLSTN1-202ENST00000377298 C2orf82Q6UX34 121 aa13.8□□□□□ -0.2
CLSTN1-202ENST00000377298 DNAJC9-AS1A6NH13 148 aa13.8□□□□□ -0.2
CLSTN1-202ENST00000377298 MRPL36Q9P0J6 103 aaKnown RBP13.8□□□□□ -0.2
CLSTN1-202ENST00000377298 ZNF843Q8N446 348 aa13.8□□□□□ -0.2
CLSTN1-202ENST00000377298 P0C879 139 aa13.79□□□□□ -0.2
CLSTN1-202ENST00000377298 CITED2Q99967 270 aaPredicted RBP13.79□□□□□ -0.2
CLSTN1-202ENST00000377298 TMEM126AQ9H061 195 aa13.79□□□□□ -0.2
CLSTN1-202ENST00000377298 ATP5G1P05496 136 aa13.79□□□□□ -0.2
CLSTN1-202ENST00000377298 CCL18P55774 89 aa13.78□□□□□ -0.2
CLSTN1-202ENST00000377298 ADAMTSL5Q6ZMM2 481 aa13.78□□□□□ -0.2
CLSTN1-202ENST00000377298 COX8AP10176 69 aa13.78□□□□□ -0.2
CLSTN1-202ENST00000377298 INSL3P51460 131 aa13.78□□□□□ -0.2
CLSTN1-202ENST00000377298 PRSS29PA6NIE9 313 aa13.78□□□□□ -0.2
CLSTN1-202ENST00000377298 IGHV4-31P0DP07 118 aa13.78□□□□□ -0.2
CLSTN1-202ENST00000377298 DYSFO75923 2080 aa13.77□□□□□ -0.2
CLSTN1-202ENST00000377298 C9orf118A6NHY6 69 aa13.77□□□□□ -0.2
CLSTN1-202ENST00000377298 PROP1O75360 226 aa13.77□□□□□ -0.2
CLSTN1-202ENST00000377298 NXPH4O95158 308 aa13.77□□□□□ -0.2
CLSTN1-202ENST00000377298 SH2D6Q7Z4S9 175 aa13.77□□□□□ -0.2
CLSTN1-202ENST00000377298 Q9HAA7 133 aa13.77□□□□□ -0.2
CLSTN1-202ENST00000377298 CLPSL2Q6UWE3 100 aa13.77□□□□□ -0.21
CLSTN1-202ENST00000377298 MRPL23Q16540 153 aaKnown RBP13.77□□□□□ -0.21
CLSTN1-202ENST00000377298 PRAC2D3DTV9 90 aa13.76□□□□□ -0.21
CLSTN1-202ENST00000377298 TRAV8-3A0A0A6YYJ7 113 aa13.76□□□□□ -0.21
CLSTN1-202ENST00000377298 IGHG4P01861 327 aa13.76□□□□□ -0.21
CLSTN1-202ENST00000377298 SPANXA1Q9NS26 97 aa13.76□□□□□ -0.21
CLSTN1-202ENST00000377298 C11orf71Q6IPW1 123 aa13.76□□□□□ -0.21
CLSTN1-202ENST00000377298 MAJINQ3KP22 176 aa13.76□□□□□ -0.21
CLSTN1-202ENST00000377298 J3QQQ9 107 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 CRIP3Q6Q6R5 217 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 NUPR1O60356 82 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 GAGE2BQ13066 116 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 GAGE2EQ4V326 116 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 GAGE2DQ9UEU5 116 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 SMAD5-AS1Q9Y6J3 95 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 Q6YL49 198 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 H3BMM0 161 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 SUMO4Q6EEV6 95 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 UBE2WQ96B02 151 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 C1orf43Q9BWL3 253 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 C11orf1Q9H5F2 150 aa13.75□□□□□ -0.21
CLSTN1-202ENST00000377298 UNQ9165/PRO28630Q6UXU0 137 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 K7EQD1 137 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 SPRY2O43597 315 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 IGF1P05019 195 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 ZFAND6Q6FIF0 208 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 WFDC11Q8NEX6 87 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 BVES-AS1Q5T3Y7 98 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 ICOSQ9Y6W8 199 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 ZNF747Q9BV97 191 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 WNK1Q9H4A3 2382 aa13.74□□□□□ -0.21
CLSTN1-202ENST00000377298 KMT2EQ8IZD2 1858 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 TMEM61Q8N0U2 210 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 ATP6V0E2Q8NHE4 81 aa13.73□□□□□ -0.21
CLSTN1-202ENST00000377298 TRBV6-1A0A0K0K1D8 114 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms