RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 TRAV26-2A0A0B4J265 109 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 TEX48A0A1B0GUV7 120 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 C7orf71A4D174 169 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 TSPAN13O95857 204 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 ORM1P02763 201 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 OR2K2Q8NGT1 345 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 IFI27L1Q96BM0 104 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 OR11H12B2RN74 326 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 NEGR1Q7Z3B1 354 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 OR11H1Q8NG94 326 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 OR11H2Q8NH07 326 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 PDZD2O15018 2839 aa7.19□□□□□ -1.26
TRIM39-202ENST00000376659 K7EMT4 169 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 NXT2Q9NPJ8 142 aaKnown RBP7.18□□□□□ -1.26
TRIM39-202ENST00000376659 TMEM8BA6NDV4 472 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 TMEM78Q5T7P6 136 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 KRTAP1-3Q8IUG1 177 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 LINC00477Q96M19 166 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 C10orf99Q6UWK7 81 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 OR4X2Q8NGF9 303 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 RNF183Q96D59 192 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
TRIM39-202ENST00000376659 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.17□□□□□ -1.269e-7■■■■■ 39.9
TRIM39-202ENST00000376659 PRRC2AP48634 2157 aaKnown RBP7.17□□□□□ -1.26
TRIM39-202ENST00000376659 H3BUT2 72 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 J3QR89 54 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 SMIM17P0DL12 118 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 RPL32P62910 135 aaKnown RBP7.17□□□□□ -1.26
TRIM39-202ENST00000376659 NRGNQ92686 78 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 OVOL1O14753 267 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 UFSP1Q6NVU6 142 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 JMJD8Q96S16 334 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 TMEM89A2RUT3 159 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 A8MTW9 85 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 TM4SF20Q53R12 229 aa7.17□□□□□ -1.26
TRIM39-202ENST00000376659 TIMM8BQ9Y5J9 83 aaPredicted RBP7.17□□□□□ -1.26
TRIM39-202ENST00000376659 A4D1N5 150 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 F6UB75 175 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 LEPP41159 167 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 PHLDA1Q8WV24 401 aaPredicted RBP7.16□□□□□ -1.26
TRIM39-202ENST00000376659 TMEM158Q8WZ71 300 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 M0R381 172 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 GAGE5Q13069 117 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 GAGE6Q13070 117 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 LY6EQ16553 131 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 C16orf92Q96LL3 132 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 APCP25054 2843 aa7.16□□□□□ -1.26
TRIM39-202ENST00000376659 H3BVH4 76 aa7.15□□□□□ -1.26
TRIM39-202ENST00000376659 TOMM6Q96B49 74 aa7.15□□□□□ -1.26
TRIM39-202ENST00000376659 ODF3Q96PU9 254 aa7.15□□□□□ -1.26
TRIM39-202ENST00000376659 MRPL16Q9NX20 251 aaKnown RBP7.15□□□□□ -1.26
TRIM39-202ENST00000376659 NACAE9PAV3 2078 aa7.15□□□□□ -1.26
TRIM39-202ENST00000376659 ZNF702PQ9H963 129 aa7.15□□□□□ -1.26
TRIM39-202ENST00000376659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.15□□□□□ -1.27
TRIM39-202ENST00000376659 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.27
TRIM39-202ENST00000376659 Q8N2B8 174 aa7.15□□□□□ -1.27
TRIM39-202ENST00000376659 C18orf15Q96N68 181 aa7.15□□□□□ -1.27
TRIM39-202ENST00000376659 BBC3Q96PG8 261 aaPredicted RBP7.15□□□□□ -1.27
TRIM39-202ENST00000376659 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.27
TRIM39-202ENST00000376659 HIGD1BQ9P298 99 aa7.15□□□□□ -1.27
TRIM39-202ENST00000376659 TRAV12-1A0A0B4J245 112 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 B4DSR2 109 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 IGHV4-59P01825 116 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 DEFB112Q30KQ8 113 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 MORN3Q6PF18 240 aaPredicted RBP7.14□□□□□ -1.27
TRIM39-202ENST00000376659 RAB37Q96AX2 223 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 C9orf85Q96MD7 179 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 SMIM2Q9BVW6 85 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 RHPN1-AS1Q9BWJ2 59 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 SPCS1Q9Y6A9 102 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 SPRY2O43597 315 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 TSHBP01222 138 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 IGHV3-11P01762 117 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 K7EP34 96 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 SLC25A16P16260 332 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 NEXN-AS1Q8NBZ9 246 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 OR9G4Q8NGQ1 327 aa7.14□□□□□ -1.27
TRIM39-202ENST00000376659 CENPEQ02224 2701 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 IGHV4OR15-8A0A075B7B6 117 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 A0A087WW49 117 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 CRYGDP07320 174 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 LAGE3Q14657 143 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 AMTNQ6UX39 209 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 WFDC3Q8IUB2 231 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 RPL39LQ96EH5 51 aaKnown RBP7.13□□□□□ -1.27
TRIM39-202ENST00000376659 C20orf78Q9BR46 151 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 TRAV21A0A0B4J279 112 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 DSCR9P59020 149 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 ANAPC13Q9BS18 74 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 A0A087WX48 190 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 K7EMI3 77 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 M0QXV9 152 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 LGALS9O00182 355 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 GNRH2O43555 120 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 TMEM97Q5BJF2 176 aa7.13□□□□□ -1.27
TRIM39-202ENST00000376659 SEC11AP67812 179 aa7.12□□□□□ -1.27
TRIM39-202ENST00000376659 Q6YL49 198 aa7.12□□□□□ -1.27
TRIM39-202ENST00000376659 CMYA5Q8N3K9 4069 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms